RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 CD3EP07766 207 aa17■□□□□ 0.31
DDX55-205ENST00000538744 SNTB1Q13884 538 aaKnown RBP17■□□□□ 0.31
DDX55-205ENST00000538744 BAP18Q8IXM2 172 aa17■□□□□ 0.31
DDX55-205ENST00000538744 RFESDQ8TAC1 157 aa17■□□□□ 0.31
DDX55-205ENST00000538744 LRRC46Q96FV0 321 aa17■□□□□ 0.31
DDX55-205ENST00000538744 MED9Q9NWA0 146 aa17■□□□□ 0.31
DDX55-205ENST00000538744 OR6C3Q9NZP0 311 aa17■□□□□ 0.31
DDX55-205ENST00000538744 CACNA1DQ01668 2161 aa17■□□□□ 0.31
DDX55-205ENST00000538744 DSCAMO60469 2012 aa17■□□□□ 0.31
DDX55-205ENST00000538744 E7EQL1 145 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 ZNF16P17020 682 aaPredicted RBP16.99■□□□□ 0.31
DDX55-205ENST00000538744 P2RY1P47900 373 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 EDDM3BP56851 147 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 EIF5AP63241 154 aaKnown RBP16.99■□□□□ 0.31
DDX55-205ENST00000538744 TEX36Q5VZQ5 186 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 C14orf79Q96F83 325 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 CXorf58Q96LI9 332 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 ZNF665Q9H7R5 613 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 RNF150Q9ULK6 438 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 IGHV3-43A0A0B4J1X8 118 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 A0A1B0GW55 424 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 GPR137BO60478 399 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 DUX4L2P0CJ85 424 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 DUX4L3P0CJ86 424 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 DUX4L4P0CJ87 422 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 DUX4L5P0CJ88 424 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 DUX4L6P0CJ89 424 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 DUX4L7P0CJ90 424 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 IGHV3-43DP0DP04 118 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 SLC25A6P12236 298 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 ADORA2A-AS1P86434 159 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 FAM74A1Q5RGS3 127 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 GPR157Q5UAW9 335 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 FAM53AQ6NSI3 398 aaPredicted RBP16.99■□□□□ 0.31
DDX55-205ENST00000538744 DEFB108BQ8NET1 73 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 GAFA1Q96PS6 74 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 FAM234AQ9H0X4 552 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 DUX4Q9UBX2 424 aa16.99■□□□□ 0.31
DDX55-205ENST00000538744 POLEQ07864 2286 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 ICE1Q9Y2F5 2266 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.98■□□□□ 0.31
DDX55-205ENST00000538744 MEX3AA1L020 520 aaKnown RBP16.98■□□□□ 0.31
DDX55-205ENST00000538744 PVALBP20472 110 aaPredicted RBP16.98■□□□□ 0.31
DDX55-205ENST00000538744 LY6DQ14210 128 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 DMBX1Q8NFW5 382 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 RNASE11Q8TAA1 199 aaKnown RBP16.98■□□□□ 0.31
DDX55-205ENST00000538744 FAM216AQ8WUB2 273 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 EDARADDQ8WWZ3 215 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 LSM10Q969L4 123 aaKnown RBP16.98■□□□□ 0.31
DDX55-205ENST00000538744 SAP30LQ9HAJ7 183 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 RAB9BQ9NP90 201 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 PFDN2Q9UHV9 154 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 JPT1Q9UK76 154 aa16.98■□□□□ 0.31
DDX55-205ENST00000538744 A0A1B0GU03 582 aa16.97■□□□□ 0.31
DDX55-205ENST00000538744 SELLP14151 372 aa16.97■□□□□ 0.31
DDX55-205ENST00000538744 ZNF788Q6ZQV5 615 aa16.97■□□□□ 0.31
DDX55-205ENST00000538744 TGIF2LYQ8IUE0 185 aa16.97■□□□□ 0.31
DDX55-205ENST00000538744 ZCCHC24Q8N2G6 241 aaKnown RBP16.97■□□□□ 0.31
DDX55-205ENST00000538744 LINC01560Q8TB33 94 aa16.97■□□□□ 0.31
DDX55-205ENST00000538744 DYNLRB1Q9NP97 96 aa16.97■□□□□ 0.31
DDX55-205ENST00000538744 FBXL17Q9UF56 701 aa16.97■□□□□ 0.31
DDX55-205ENST00000538744 F2RL2O00254 374 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 ARID1AO14497 2285 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 IGKV1-39P01597 117 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 GYPAP02724 150 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 IGKV1D-39P04432 117 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 APOBEC3AP31941 199 aaPredicted RBP16.96■□□□□ 0.31
DDX55-205ENST00000538744 TMEM33P57088 247 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 CATR1Q13166 79 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 EIF4EBP1Q13541 118 aaPredicted RBP16.96■□□□□ 0.31
DDX55-205ENST00000538744 ZNF585BQ52M93 769 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 C1orf87Q8N0U7 546 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 ZNF808Q8N4W9 903 aaPredicted RBP16.96■□□□□ 0.31
DDX55-205ENST00000538744 NEUROG1Q92886 237 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 GPR146Q96CH1 333 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 C5orf30Q96GV9 206 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 CCL13Q99616 98 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 C11orf1Q9H5F2 150 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 TANC2Q9HCD6 1990 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 DCAF16Q9NXF7 216 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 GNG12Q9UBI6 72 aa16.96■□□□□ 0.31
DDX55-205ENST00000538744 A0A0G2JRQ6 117 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 NKX6-3A6NJ46 265 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 GAPDHP04406 335 aaKnown RBP16.96■□□□□ 0.3
DDX55-205ENST00000538744 ID3Q02535 119 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 EFNB3Q15768 340 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 LTC4SQ16873 150 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 CXorf66Q5JRM2 361 aaPredicted RBP16.96■□□□□ 0.3
DDX55-205ENST00000538744 MS4A5Q9H3V2 200 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 CALYQ9NYX4 217 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 PSG11Q9UQ72 335 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 RNF115Q9Y4L5 304 aa16.96■□□□□ 0.3
DDX55-205ENST00000538744 DSCAML1Q8TD84 2053 aa16.95■□□□□ 0.3
DDX55-205ENST00000538744 TRAV38-1A0A0B4J264 116 aa16.95■□□□□ 0.3
DDX55-205ENST00000538744 DEFB108AA8MXU0 73 aa16.95■□□□□ 0.3
DDX55-205ENST00000538744 LGALS8O00214 317 aa16.95■□□□□ 0.3
DDX55-205ENST00000538744 SIGLEC5O15389 551 aa16.95■□□□□ 0.3
DDX55-205ENST00000538744 YPEL1O60688 119 aa16.95■□□□□ 0.3
DDX55-205ENST00000538744 EPHA1P21709 976 aa16.95■□□□□ 0.3
DDX55-205ENST00000538744 GRNP28799 593 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms