RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 GTF2BQ00403 316 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 BSPH1Q075Z2 132 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 OR4D1Q15615 310 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 TMEM249Q2WGJ8 235 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 OR10J3Q5JRS4 329 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 OR4P4Q8NGL7 312 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 SIKE1Q9BRV8 207 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 MND1Q9BWT6 205 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 CDCA4Q9BXL8 241 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 GTSF1LQ9H1H1 148 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 MRM2Q9UI43 246 aaKnown RBP0.92□□□□□ -2.26
CCDC7-208ENST00000537047 MYO15BQ96JP2 1530 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 RAB3GAP2Q9H2M9 1393 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 NYNRINQ9P2P1 1898 aaKnown RBP0.92□□□□□ -2.26
CCDC7-208ENST00000537047 ARHGAP32A7KAX9 2087 aa0.92□□□□□ -2.26
CCDC7-208ENST00000537047 EFCAB9A8MZ26 197 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 CDK14O94921 469 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 SLC25A16P16260 332 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 PEBP1P30086 187 aaKnown RBP0.91□□□□□ -2.26
CCDC7-208ENST00000537047 PPP1CCP36873 323 aaKnown RBP0.91□□□□□ -2.26
CCDC7-208ENST00000537047 KRTAP10-4P60372 401 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-208ENST00000537047 DEFA6Q01524 100 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 RAB31Q13636 194 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 PDGFRLQ15198 375 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 UAP1Q16222 522 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-208ENST00000537047 MRPL51Q4U2R6 128 aaKnown RBP0.91□□□□□ -2.26
CCDC7-208ENST00000537047 CENPWQ5EE01 88 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 COA5Q86WW8 74 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 ANGPTL6Q8NI99 470 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 LHFPL5Q8TAF8 219 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 SUN5Q8TC36 379 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 C10orf105Q8TEF2 133 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 CCDC127Q96BQ5 260 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 UPK3BQ9BT76 320 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 PECRQ9BY49 303 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 UGT2B28Q9BY64 529 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 BABAM2Q9NXR7 383 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 STK38LQ9Y2H1 464 aa0.91□□□□□ -2.26
CCDC7-208ENST00000537047 MYO5BQ9ULV0 1848 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 IGHV3-15A0A0B4J1V0 119 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 LOC100506127A0A0U1RQW1 187 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 GPR171O14626 319 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 LIN7AO14910 233 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-208ENST00000537047 SGCEO43556 437 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 GADD45AP24522 165 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 ATP6V0CP27449 155 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 OR10A3P58181 314 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 FAM3AP98173 230 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 STX3Q13277 289 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 Q3ZCU0 254 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 TIMM23BQ5SRD1 257 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 LGALS9CQ6DKI2 356 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 TTC33Q6PID6 262 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-208ENST00000537047 AGTRAPQ6RW13 159 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 RASL11AQ6T310 242 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 Q6ZRN7 208 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-208ENST00000537047 SLC35F6Q8N357 371 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 ZNF283Q8N7M2 679 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 OR11H1Q8NG94 326 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 ZNF75CPQ92670 426 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-208ENST00000537047 SERPINB11Q96P15 392 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 CHST5Q9GZS9 411 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 METTL17Q9H7H0 456 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-208ENST00000537047 LINC00527Q9UJ94 153 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 ENPP5Q9UJA9 477 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 KIAA0232Q92628 1395 aa0.9□□□□□ -2.27
CCDC7-208ENST00000537047 DENND4BO75064 1496 aaPredicted RBP0.89□□□□□ -2.27
CCDC7-208ENST00000537047 GRIFINA4D1Z8 144 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 H3BPC8 53 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 UBFD1O14562 309 aaKnown RBP0.89□□□□□ -2.27
CCDC7-208ENST00000537047 LY6HO94772 140 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 TPM1P09493 284 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 LIMS3P0CW19 117 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 LIMS4P0CW20 117 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 LCN1P31025 176 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 G6PCP35575 357 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 PSMB3P49720 205 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 SULT1A2P50226 295 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 RAP1GDS1P52306 607 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 RELAQ04206 551 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 EXOC3L4Q17RC7 722 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 TRMT12Q53H54 448 aaKnown RBP0.89□□□□□ -2.27
CCDC7-208ENST00000537047 RBM48Q5RL73 367 aaKnown RBP0.89□□□□□ -2.27
CCDC7-208ENST00000537047 AADACL4Q5VUY2 407 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 GLT6D1Q7Z4J2 308 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 DOLPP1Q86YN1 238 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 YIPF7Q8N8F6 280 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 OR51H1Q8NH63 302 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 CCDC12Q8WUD4 166 aaPredicted RBP0.89□□□□□ -2.27
CCDC7-208ENST00000537047 TAMM41Q96BW9 452 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 C19orf60Q96EN9 201 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 CYTH2Q99418 400 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 MED18Q9BUE0 208 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 UBQLN4Q9NRR5 601 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 SOX21Q9Y651 276 aaPredicted RBP0.89□□□□□ -2.27
CCDC7-208ENST00000537047 RTTNQ86VV8 2226 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 ATAD5Q96QE3 1844 aa0.89□□□□□ -2.27
CCDC7-208ENST00000537047 A0A1B0GVG6 124 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 LINC00862A6NCI5 91 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 TMEM235A6NFC5 223 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms