RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SCTP09683 121 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 GNB3P16520 340 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 CD36P16671 472 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 IL3RAP26951 378 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 SDC2P34741 201 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 OR3A3P47888 321 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 ARSJQ5FYB0 599 aaPredicted RBP10.46□□□□□ -0.73
PRKDC-206ENST00000536429 C10orf99Q6UWK7 81 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 Q8N6K4 173 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 C5orf56Q8N8D9 126 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 EAF1Q96JC9 268 aaPredicted RBP10.46□□□□□ -0.73
PRKDC-206ENST00000536429 AKR1E2Q96JD6 320 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 YPEL2Q96QA6 119 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 CENPOQ9BU64 300 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 Q9N2K0 584 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 OR1A1Q9P1Q5 309 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 MOB4Q9Y3A3 225 aa10.46□□□□□ -0.73
PRKDC-206ENST00000536429 PRKDCP78527 4128 aaKnown RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 IGKV1-6A0A0C4DH72 117 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 NOTOA8MTQ0 251 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 ST8SIA5O15466 376 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 SNRPBP14678 240 aaKnown RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 RAB6AP20340 208 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 TGFBR1P36897 503 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 HLA-DRB3P79483 266 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 MXD1Q05195 221 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 EBI3Q14213 229 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 C9orf152Q5JTZ5 239 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 MOB1BQ7L9L4 216 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 TGIF2LXQ8IUE1 241 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 IZUMO1Q8IYV9 350 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 OR10R2Q8NGX6 335 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 FAM110DQ8TAY7 271 aaPredicted RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 CITED2Q99967 270 aaPredicted RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 CMSS1Q9BQ75 279 aaKnown RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 MRPL20Q9BYC9 149 aaKnown RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 IFI27L2Q9H2X8 130 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 RIMS4Q9H426 269 aaPredicted RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 C12orf4Q9NQ89 552 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 ABRACLQ9P1F3 81 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 DAPK2Q9UIK4 370 aa10.45□□□□□ -0.74
PRKDC-206ENST00000536429 ELF5Q9UKW6 265 aaPredicted RBP10.45□□□□□ -0.74
PRKDC-206ENST00000536429 NOTCH1P46531 2555 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 A0A075B6Q4 140 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 MFNGO00587 321 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 LANCL1O43813 399 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 FBXO24O75426 580 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 HIST1H1DP16402 221 aaKnown RBP10.44□□□□□ -0.74
PRKDC-206ENST00000536429 TCTEX1D4Q5JR98 221 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 STEAP3Q658P3 488 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 SFXN4Q6P4A7 337 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 DTX3Q8N9I9 347 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 TSPAN14Q8NG11 270 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 MAFIPQ8WZ33 124 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 KCTD7Q96MP8 289 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 PLSCR3Q9NRY6 295 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 SLC23A1Q9UHI7 598 aa10.44□□□□□ -0.74
PRKDC-206ENST00000536429 SAA2-SAA4A0A096LPE2 208 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 LINC01548A6NM66 108 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 M0QZK8 103 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 PEX14O75381 377 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 CSF1P09603 554 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 CD3GP09693 182 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 SAA2P0DJI9 122 aaPredicted RBP10.43□□□□□ -0.74
PRKDC-206ENST00000536429 CD1BP29016 333 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 LSAMPQ13449 338 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 C2orf68Q2NKX9 166 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 NSUN5P1Q3KNT7 163 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 RPL39P5Q59GN2 51 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 LY6G6FQ5SQ64 297 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 ZNF833PQ6ZTB9 187 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 TPRA1Q86W33 373 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 Q8N9W7 124 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 OR2AK2Q8NG84 335 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 OR5AU1Q8NGC0 362 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 LGALS14Q8TCE9 139 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 RITA1Q96K30 269 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 NABP2Q9BQ15 211 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 ZNF251Q9BRH9 671 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 ATG5Q9H1Y0 275 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 MMP27Q9H306 513 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 ZNF230Q9UIE0 474 aaPredicted RBP10.43□□□□□ -0.74
PRKDC-206ENST00000536429 LINC00527Q9UJ94 153 aa10.43□□□□□ -0.74
PRKDC-206ENST00000536429 A0A087WXM4 84 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 NCBP2LA6PVI3 153 aaKnown RBP10.42□□□□□ -0.74
PRKDC-206ENST00000536429 TRDCB7Z8K6 153 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 FGF16O43320 207 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 RGS11O94810 467 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 TNFAIP8O95379 198 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 MOSP00540 346 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 FCGR3AP08637 254 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 CEACAM6P40199 344 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 F2RL1P55085 397 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 OR5H6Q8NGV6 325 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 OR2T10Q8NGZ9 312 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 PTX4Q96A99 478 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 YIPF6Q96EC8 236 aa10.42□□□□□ -0.74
PRKDC-206ENST00000536429 ABHD14BQ96IU4 210 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms