RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 A0A1B0GX78 115 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 RBFOX3A6NFN3 312 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TMEM202A6NGA9 273 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 GAGE10A6NGK3 116 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 A6NIN4 97 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FAM90A7PA6NKC0 464 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FAM90A22PA8MWA6 464 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FAM90A12PA8MX19 464 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FAM90A23PA8MXZ1 464 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TEX22C9J3V5 150 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SIRPB1O00241 398 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HS3ST1O14792 307 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TAX1BP3O14907 124 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 DUX1O43812 170 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 RAMP1O60894 148 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HYPMO75409 117 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZFAND5O76080 213 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 DIRAS1O95057 198 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 WISP3O95389 354 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 UTS2O95399 124 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 KLF8O95600 359 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 NRASP01111 189 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 IFNA1P01562 189 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 MAS1P04201 325 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HSPB1P04792 205 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 REG1AP05451 166 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 H1F0P07305 194 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 SRP19P09132 144 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 DANCRP0C864 163 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZNF286BP0CG31 522 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 LIMS3P0CW19 117 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 LIMS4P0CW20 117 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 PSG2P11465 335 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 PTHLHP12272 177 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 LAMP2P13473 410 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FUT1P19526 365 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 USF1P22415 310 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 ELAVL4P26378 380 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 NMBRP28336 390 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ADORA2BP29275 332 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TSPOP30536 169 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HTR1FP30939 366 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 S100A3P33764 101 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ACVR1BP36896 505 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 GUCA1AP43080 201 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 GYG1P46976 350 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HINT1P49773 126 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 DUSP3P51452 185 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 P2RX1P51575 399 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 CNN1P51911 297 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 LBX1P52954 281 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A1P53007 311 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FOXA1P55317 472 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 CLDN2P57739 230 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SMIM11AP58511 58 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TAS2R20P59543 309 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 HLA-DRB3P79483 266 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 MRPS34P82930 218 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZNF92Q03936 586 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZFP36L1Q07352 338 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 PLCXD2Q0VAA5 305 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 EIF2B1Q14232 305 aaKnown RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 KIR2DS3Q14952 304 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 P2RY6Q15077 328 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 OR7A5Q15622 319 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 GABRA6Q16445 453 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 DUSP5Q16690 384 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 PCK2Q16822 640 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ANKRD55Q3KP44 614 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A52Q3SY17 297 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FAM174BQ3ZCQ3 159 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SPATA45Q537H7 98 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TP53I3Q53FA7 332 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TCEAL5Q5H9L2 206 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 LRRC73Q5JTD7 316 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ACTL10Q5JWF8 245 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 LYPLAL1Q5VWZ2 237 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 AMMECR1LQ6DCA0 310 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 UFSP1Q6NVU6 142 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 LEG1Q6P5S2 330 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 PAQR6Q6TCH4 344 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 C17orf99Q6UX52 265 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 Q6ZSR9 355 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 Q7L0L9 218 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 FA2HQ7L5A8 372 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SLC16A9Q7RTY1 509 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 CENPVQ7Z7K6 275 aaPredicted RBP2.07□□□□□ -2.08
SKA3-207ENST00000536239 MUC15Q8N387 334 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SMIM20Q8N5G0 67 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 DEFB125Q8N687 156 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TEX26Q8N6G2 289 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 TMEM251Q8N6I4 163 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 CSNK1A1LQ8N752 337 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZNF615Q8N8J6 731 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 ZNF709Q8N972 641 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 OR2AE1Q8NHA4 323 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 NFKBIDQ8NI38 313 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 SLC25A40Q8TBP6 338 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 STAG3L4Q8TBR4 150 aa2.07□□□□□ -2.08
SKA3-207ENST00000536239 MRAPQ8TCY5 172 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms