RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SNX22Q96L94 193 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 FUT9Q9Y231 359 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 TRBV5-3A0A0A0MS03 114 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 HAX1O00165 279 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 AP4M1O00189 453 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 NDUFA2O43678 99 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 STAG3L2P0CL84 134 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 CFHR5Q9BXR6 569 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 IL19Q9UHD0 177 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 LEUTXA8MZ59 168 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 OR2H2O95918 312 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 C1QAP02745 245 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 LAMTOR1Q6IAA8 161 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 KLHDC2Q9Y2U9 406 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 CENPVL1A0A0U1RR11 272 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 PITX3O75364 302 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 SP9P0CG40 484 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 PTX4Q96A99 478 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 ABHD14BQ96IU4 210 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 ASAH2BP0C7U1 165 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 OR10J1P30954 320 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 DPPA3Q6W0C5 159 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 FAM216AQ8WUB2 273 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 RNF115Q9Y4L5 304 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 FAM74A7A6NL05 159 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 ATP5J2P56134 94 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 MS4A3Q96HJ5 214 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 MIXL1Q9H2W2 232 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 KLK13Q9UKR3 277 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 NUBP1P53384 320 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 C11orf91Q3C1V1 193 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 MMD2Q8IY49 270 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 PITPNC1Q9UKF7 332 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 TMEM218A2RU14 115 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 NPIPB6E9PJ23 425 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 TSPAN2O60636 221 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 ZNF343Q6P1L6 599 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 ISOC2Q96AB3 205 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 OPN4Q9UHM6 478 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 ST6GALNAC2Q9UJ37 374 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 KIAA1551Q9HCM1 1747 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 FAM181BA6NEQ2 426 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 HCP5Q6MZN7 132 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 WDFY1Q8IWB7 410 aa15.73■□□□□ 0.11
SFSWAP-203ENST00000535236 RPL24P83731 157 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 SLC25A53Q5H9E4 307 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 FHL5Q5TD97 284 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 RAB33BQ9H082 229 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 SIRT7Q9NRC8 400 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 PILRBQ9UKJ0 227 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 LOC389332A0A1B0GUA5 103 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 H3BVH4 76 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 ZNF324O75467 553 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 TMEM204Q9BSN7 226 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 PXMP4Q9Y6I8 212 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 H3BQ15 152 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 ATP6V0CP27449 155 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 ZNF645Q8N7E2 425 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 AURKAIP1Q9NWT8 199 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 TMEM56-RWDD3S4R434 201 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 RPL8P62917 257 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 RAX2Q96IS3 184 aa15.72■□□□□ 0.11
SFSWAP-203ENST00000535236 IGKV3D-15A0A087WSY6 115 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 OR4C46A6NHA9 309 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 IGKV3-15P01624 115 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 CXCL3P19876 107 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 FAM106AQ4KMX7 169 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 ZNF826PQ6ZT77 177 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 GPA33Q99795 319 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 hCG_38984A0A1B0GV85 526 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 DLL1O00548 723 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 ZNHIT1O43257 154 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 SEC11BP0C7V7 166 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 GCSHP23434 173 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 PET117Q6UWS5 81 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 SLC25A45Q8N413 288 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 SAP25Q8TEE9 199 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 IDI2-AS1Q9NZ38 188 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 MIOXQ9UGB7 285 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 STARD6P59095 220 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 PCSK4Q6UW60 755 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 RAB24Q969Q5 203 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 IFT22Q9H7X7 185 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 A6NDN8 102 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 TMEM229AB2RXF0 380 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 IGSF11Q5DX21 431 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 TMEM91Q6ZNR0 172 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 OVCH2Q7RTZ1 564 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 OR8G5Q8NG78 346 aa15.71■□□□□ 0.11
SFSWAP-203ENST00000535236 TRAV20A0A0B4J274 112 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 IGF2P01344 180 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 SNRPCP09234 159 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 NAT2P11245 290 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 HOXB1P14653 301 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 HOXA6P31267 233 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 NCMAPQ5T1S8 102 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 C19orf48Q6RUI8 117 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 PPIAL4CA0A0B4J2A2 164 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 A0A1W2PPC1 479 aa15.7■□□□□ 0.1
SFSWAP-203ENST00000535236 CYB5R3P00387 301 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms