RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 PILRBQ9UKJ0 227 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 KCNS2Q9ULS6 477 aa8.71□□□□□ -1.02
DDB1-204ENST00000535147 B4DEV8 164 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 MDH2P40926 338 aaKnown RBP8.7□□□□□ -1.02
DDB1-204ENST00000535147 FAM58AQ8N1B3 248 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 OR5A2Q8NGI9 324 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 OR10G4Q8NGN3 311 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 OR4C12Q96R67 309 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 GFOD1Q9NXC2 390 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 COL6A3P12111 3177 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 ZDBF2Q9HCK1 2354 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 MAP1LC3B2A6NCE7 125 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 PTBP3O95758 552 aaKnown RBP8.7□□□□□ -1.02
DDB1-204ENST00000535147 IGKV1D-33P01593 117 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 IGKV1-33P01594 117 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 CA6P23280 308 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 RND2P52198 227 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 CLN3Q13286 438 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 TESK1Q15569 626 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 ZNF585BQ52M93 769 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 OR13D1Q8NGV5 346 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 OR5P3Q8WZ94 311 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 MAP1LC3BQ9GZQ8 125 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 OPA3Q9H6K4 179 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 SIT1Q9Y3P8 196 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 KNTC1P50748 2209 aa8.7□□□□□ -1.02
DDB1-204ENST00000535147 UBE2L5PA0A1B0GUS4 154 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 SIRPB1O00241 398 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 NTN3O00634 580 aaPredicted RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 PHOX2AO14813 284 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 PNRC1Q12796 327 aaPredicted RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 ADIRFQ15847 76 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 C3AR1Q16581 482 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 LRRC75BQ2VPJ9 315 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 TCEAL6Q6IPX3 200 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 MAFAQ8NHW3 353 aaPredicted RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 MBD3L1Q8WWY6 194 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 TMEM45BQ96B21 275 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 C14orf144Q96I85 54 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 POM121L2Q96KW2 1035 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 PACRGQ96M98 296 aaPredicted RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 ELOA3CA0A087WX78 387 aaPredicted RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 FAM166BA8MTA8 275 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 DEGS1O15121 323 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 YKT6O15498 198 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 TUBG1P23258 451 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 RPS16P62249 146 aaKnown RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 PMS2CLQ68D20 193 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 RPP25LQ8N5L8 163 aaKnown RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 LHX4Q969G2 390 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 RPUSD4Q96CM3 377 aaKnown RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 HIST1H2BLQ99880 126 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 RIMS4Q9H426 269 aaPredicted RBP8.69□□□□□ -1.02
DDB1-204ENST00000535147 SMOC1Q9H4F8 434 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 VAX2Q9UIW0 290 aa8.69□□□□□ -1.02
DDB1-204ENST00000535147 TNRC6AQ8NDV7 1962 aaKnown RBP8.68□□□□□ -1.02
DDB1-204ENST00000535147 ANKRD30BLA7E2S9 258 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 ZNF737O75373 536 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 WNT5AP41221 380 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 CD81P60033 236 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 ODF1Q14990 250 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 FAM53AQ6NSI3 398 aaPredicted RBP8.68□□□□□ -1.02
DDB1-204ENST00000535147 OR4X1Q8NH49 305 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 SMIM7Q9BQ49 75 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 WDR61Q9GZS3 305 aaKnown RBP8.68□□□□□ -1.02
DDB1-204ENST00000535147 PCSK5Q92824 1860 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 IGKV3D-15A0A087WSY6 115 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 SLC25A6P12236 298 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 LHX2P50458 406 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 GNG3P63215 75 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 HBG1P69891 147 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 HBG2P69892 147 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 RTP5Q14D33 572 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 NRN1LQ496H8 165 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 TIPARPQ7Z3E1 657 aaKnown RBP8.68□□□□□ -1.02
DDB1-204ENST00000535147 MRGPRGQ86SM5 289 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 GATAD1Q8WUU5 269 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 MEGF10Q96KG7 1140 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 PSMG3Q9BT73 122 aaPredicted RBP8.68□□□□□ -1.02
DDB1-204ENST00000535147 UFSP2Q9NUQ7 469 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 TMEM242Q9NWH2 141 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 TRAPPC2LQ9UL33 140 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 GAB2Q9UQC2 676 aa8.68□□□□□ -1.02
DDB1-204ENST00000535147 TRBV24-1A0A075B6N3 115 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 SS18L1O75177 396 aaPredicted RBP8.67□□□□□ -1.02
DDB1-204ENST00000535147 DEFA4P12838 97 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 SELEP16581 610 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 HOXC12P31275 282 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 CLDN18P56856 261 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 ERVS71-1P61550 626 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 ZNF573Q86YE8 665 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 GTF3AQ92664 365 aaKnown RBP8.67□□□□□ -1.02
DDB1-204ENST00000535147 TAF15Q92804 592 aaKnown RBP eCLIP8.67□□□□□ -1.02
DDB1-204ENST00000535147 LSM10Q969L4 123 aaKnown RBP8.67□□□□□ -1.02
DDB1-204ENST00000535147 SLC25A22Q9H936 323 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 TMEM9BQ9NQ34 198 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 SLC39A9Q9NUM3 307 aa8.67□□□□□ -1.02
DDB1-204ENST00000535147 RNF150Q9ULK6 438 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms