RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 CD80P33681 288 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 HAAOP46952 286 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 NOVA1P51513 510 aaKnown RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 GPM6AP51674 278 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 RAB1AP62820 205 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 HLA-DRB3P79483 266 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 EIF4EBP1Q13541 118 aaPredicted RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 HABP2Q14520 560 aaPredicted RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 OR8G1Q15617 311 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TSC22D1Q15714 1073 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 GUK1Q16774 197 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 RNF212Q495C1 297 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ACSF3Q4G176 576 aaPredicted RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 MIDNQ504T8 468 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 CLEC9AQ6UXN8 241 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 FOXRED2Q8IWF2 684 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TMEM252Q8N6L7 170 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 C15orf54Q8N8G6 183 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SUMF2Q8NBJ7 301 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 LFNGQ8NES3 379 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 RXFP4Q8TDU9 374 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TMEM171Q8WVE6 324 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 RPL36ALQ969Q0 106 aaKnown RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 HIST1H2BAQ96A08 127 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 APH1AQ96BI3 265 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 MALSU1Q96EH3 234 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 IP6K3Q96PC2 410 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SPIN2AQ99865 258 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SPIN2BQ9BPZ2 258 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PAPOLGQ9BWT3 736 aaKnown RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SMIM3Q9BZL3 60 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SH3BGRL3Q9H299 93 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ESRP2Q9H6T0 727 aaKnown RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PLEKHF2Q9H8W4 249 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ZDHHC11Q9H8X9 412 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 CALHM2Q9HA72 323 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 CCL28Q9NRJ3 127 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 COA4Q9NYJ1 87 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 DLL3Q9NYJ7 618 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 LUZP4Q9P127 313 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SPRR3Q9UBC9 169 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 KLF13Q9Y2Y9 288 aaPredicted RBP4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 WIPI2Q9Y4P8 454 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 LIPGQ9Y5X9 500 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 DMDP11532 3685 aa4.96□□□□□ -1.62
TNFRSF1A-206ENST00000535038 WDR87Q6ZQQ6 2873 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PTPRBP23467 1997 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TRAV1-1A0A0B4J248 108 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 A0A0G2JRQ6 117 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 A0A1B0GU03 582 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 A0A1B0GWJ7 208 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 BTBD17A6NE02 478 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 FAM166BA8MTA8 275 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 UMAD1C9J7I0 102 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TRAPPC2LH3BP13 241 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 H7C2Y5 167 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 DEGS1O15121 323 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PPIHO43447 177 aaKnown RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ADAM20O43506 726 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TRIAP1O43715 76 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TSPAN9O75954 239 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 WISP2O76076 250 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SCGB1D2O95969 90 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 MT-CO3P00414 261 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 F10P00742 488 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 IGKV1-39P01597 117 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TK1P04183 234 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 IGKV1D-39P04432 117 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 P0C879 139 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 CCL2P13500 99 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PVALBP20472 110 aaPredicted RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 AGAP20933 346 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 F2RP25116 425 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ATP6V0CP27449 155 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PPP1CCP36873 323 aaKnown RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 NKX2-1P43699 371 aaPredicted RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 FHITP49789 147 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 RAB13P51153 203 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 POLR2GP62487 172 aaKnown RBP eCLIP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 GNG3P63215 75 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 TLE1Q04724 770 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 BAXQ07812 192 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ZNF146Q15072 292 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PEA15Q15121 130 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 MSMO1Q15800 293 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ZNF766Q5HY98 468 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 CXorf66Q5JRM2 361 aaPredicted RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 AVPI1Q5T686 147 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 DPPA3Q6W0C5 159 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ZNF497Q6ZNH5 498 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 MOB1BQ7L9L4 216 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 MRPL21Q7Z2W9 205 aaKnown RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 MYPOPQ86VE0 399 aaPredicted RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 ZNF573Q86YE8 665 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 FAM58AQ8N1B3 248 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 SECTM1Q8WVN6 248 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 LSM10Q969L4 123 aaKnown RBP4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 GPR146Q96CH1 333 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 VKORC1Q9BQB6 163 aa4.95□□□□□ -1.62
TNFRSF1A-206ENST00000535038 PARD6GQ9BYG4 376 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms