RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NKX1-2Q9UD57 310 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-203ENST00000534830 JPT1Q9UK76 154 aa7.88□□□□□ -1.15
CLSTN3-203ENST00000534830 HUWE1Q7Z6Z7 4374 aaKnown RBP7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 A0A0A6YYD4 124 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 SLC22A1O15245 554 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 NAPSAO96009 420 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 IGHG4P01861 327 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 RPLP1P05386 114 aaKnown RBP7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 ELANEP08246 267 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 UCHL1P09936 223 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 HTR2CP28335 458 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 PPIFP30405 207 aaKnown RBP7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 CDX1P47902 265 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 RPS27AP62979 156 aaKnown RBP7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 GABPB1Q06547 395 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 UNC119Q13432 240 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 FOXE3Q13461 319 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 KIAA0141Q14154 515 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 KIR2DS1Q14954 304 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 SPHARQ15513 63 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 HMGN3Q15651 99 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 GLT8D1Q68CQ7 371 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 ZFAND6Q6FIF0 208 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 OR10K2Q6IF99 312 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 TMEM91Q6ZNR0 172 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 ZNF833PQ6ZTB9 187 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 ZNF695Q8IW36 515 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 PRR18Q8N4B5 295 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 KLHL30-AS1Q8NEE0 82 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 OR52L2PQ8NGH6 319 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 MYOZ3Q8TDC0 251 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 FAM46BQ96A09 425 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 RAX2Q96IS3 184 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 RITA1Q96K30 269 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 GFI1Q99684 422 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 RASL11BQ9BPW5 248 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 FAAP24Q9BTP7 215 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 ABHD14AQ9BUJ0 271 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 GON7Q9BXV9 100 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 CST11Q9H112 138 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 DCLRE1BQ9H816 532 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 LRRC42Q9Y546 428 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 CSMD3Q7Z407 3707 aa7.87□□□□□ -1.15
CLSTN3-203ENST00000534830 HYDINQ4G0P3 5121 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 TRBV6-6A0A0A6YYG2 114 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 PTGES3LE9PB15 166 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 CCL24O00175 119 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 PSMB8P28062 276 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 PPP1CCP36873 323 aaKnown RBP7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 DGCR2P98153 550 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 TPBGQ13641 420 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 C6orf201Q7Z4U5 140 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 FAM89BQ8N5H3 189 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 KCNG3Q8TAE7 436 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 NRG4Q8WWG1 115 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 GALMQ96C23 342 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 NEDD4LQ96PU5 975 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 NABP2Q9BQ15 211 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 ZNF251Q9BRH9 671 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 CHCHD6Q9BRQ6 235 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 NICN1Q9BSH3 213 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 MCRIP2Q9BUT9 160 aaKnown RBP7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 TMED9Q9BVK6 235 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 TMEM59Q9BXS4 323 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 VCXQ9H320 206 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 KCNK15Q9H427 330 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 DUSP21Q9H596 190 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 ISYNA1Q9NPH2 558 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 KCNIP1Q9NZI2 227 aa7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 ZMAT5Q9UDW3 170 aaKnown RBP7.86□□□□□ -1.15
CLSTN3-203ENST00000534830 FOXI3A8MTJ6 420 aaPredicted RBP7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 ANKRD65E5RJM6 399 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 ITGB1BP1O14713 200 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 NDUFA3O95167 84 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 BPNT1O95861 308 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 CNTFRP26992 372 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 SOX6P35712 828 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 AQP4P55087 323 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 HSD17B12Q53GQ0 312 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 RBM48Q5RL73 367 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 FAM71F2Q6NXP2 309 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 LCNL1Q6ZST4 164 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 CEACAM19Q7Z692 300 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 SVOPQ8N4V2 548 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 NPBQ8NG41 125 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 KCTD7Q96MP8 289 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 RCHY1Q96PM5 261 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 DUX3Q96PT4 197 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 AGMATQ9BSE5 352 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 MRPL20Q9BYC9 149 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 LPAR5Q9H1C0 372 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 IFI27L2Q9H2X8 130 aa7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 ZNF107Q9UII5 783 aaPredicted RBP7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 LSM4Q9Y4Z0 139 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-203ENST00000534830 SAA2-SAA4A0A096LPE2 208 aa7.84□□□□□ -1.15
CLSTN3-203ENST00000534830 IGHV7-81A0A0B4J1V7 117 aa7.84□□□□□ -1.15
CLSTN3-203ENST00000534830 NUDT19A8MXV4 375 aa7.84□□□□□ -1.15
CLSTN3-203ENST00000534830 SLC17A2O00624 439 aa7.84□□□□□ -1.15
CLSTN3-203ENST00000534830 RRP9O43818 475 aaKnown RBP7.84□□□□□ -1.15
CLSTN3-203ENST00000534830 RGS11O94810 467 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms