RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 NUBP1P53384 320 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 RPS4XP62701 263 aaKnown RBP6.9□□□□□ -1.3
CSRP1-218ENST00000533402 GAGE2BQ13066 116 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 GAGE2EQ4V326 116 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 ZNF665Q9H7R5 613 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 C1RLQ9NZP8 487 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 GAGE2DQ9UEU5 116 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 B9D1Q9UPM9 204 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 KCNE3Q9Y6H6 103 aa6.9□□□□□ -1.3
CSRP1-218ENST00000533402 H0YIG0 161 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 APOMO95445 188 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 DANCRP0C864 163 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 KISS1Q15726 138 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 TBC1D26Q86UD7 250 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 DOLPP1Q86YN1 238 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 APCDD1LQ8NCL9 501 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 MORN4Q8NDC4 146 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 C4orf45Q96LM5 186 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 OR8B2Q96RD0 313 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HDHD3Q9BSH5 251 aaPredicted RBP6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BKO60814 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BJP06899 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BOP23527 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BBP33778 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BDP58876 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BCP62807 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.31
CSRP1-218ENST00000533402 LYZL2Q7Z4W2 148 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 DEFB124Q8NES8 71 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 PRR7Q8TB68 274 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HMGCLL1Q8TB92 370 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 TNFRSF14Q92956 283 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.31
CSRP1-218ENST00000533402 CISD1Q9NZ45 108 aaKnown RBP6.9□□□□□ -1.31
CSRP1-218ENST00000533402 ERRFI1Q9UJM3 462 aaPredicted RBP6.9□□□□□ -1.31
CSRP1-218ENST00000533402 F5H697 171 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 KIAA1644Q3SXP7 199 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SIGLEC7Q9Y286 467 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ZNF257Q9Y2Q1 563 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 NDUFB3O43676 98 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 FTH1P19P0C7X4 201 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 RUNX1Q01196 453 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SPINK9Q5DT21 86 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ZNF841Q6ZN19 808 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 TGIF2LYQ8IUE0 185 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SFTPA2Q8IWL1 248 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SFTPA1Q8IWL2 248 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 OR10V1Q8NGI7 309 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 HCFC1R1Q9NWW0 138 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 CLN8Q9UBY8 286 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 CEP192Q8TEP8 1941 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 S1PR2O95136 353 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ORAOV1Q8WV07 137 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 WDR34Q96EX3 536 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 EP400Q96L91 3159 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 HOXC4P09017 264 aaPredicted RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 OR4A8P0C604 315 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ERGP11308 486 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 PVRP15151 417 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SELENOHQ8IZQ5 122 aaKnown RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 C19orf53Q9UNZ5 99 aaPredicted RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 C5orf67F2Z3F1 127 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 CCSMST1Q4G0I0 132 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ZNF766Q5HY98 468 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 IBA57Q5T440 356 aaKnown RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 GTF3C1Q12789 2109 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 A0A087WWC5 75 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 C7orf71A4D174 169 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SNAI2O43623 268 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 CBLN1P23435 193 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 SLC25A1P53007 311 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 STARD6P59095 220 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 TMEM91Q6ZNR0 172 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ZNF707Q96C28 371 aaPredicted RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 FLRT3Q9NZU0 649 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 OR51B2Q9Y5P1 312 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 NKX2-6A6NCS4 301 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 OR2A4O95047 310 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 HOXB3P14651 431 aaPredicted RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 PPP1CCP36873 323 aaKnown RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 OPRK1P41145 380 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 CLDN15P56746 228 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 Q8WTZ3 238 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 LSM10Q969L4 123 aaKnown RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 TMEM230Q96A57 120 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 OR2A7Q96R45 310 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 HSD17B10Q99714 261 aaKnown RBP6.89□□□□□ -1.31
CSRP1-218ENST00000533402 LYRM4Q9HD34 91 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 TUBD1Q9UJT1 453 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 ZNF407Q9C0G0 2248 aa6.89□□□□□ -1.31
CSRP1-218ENST00000533402 KBTBD11O94819 623 aa6.88□□□□□ -1.31
CSRP1-218ENST00000533402 OR3A4PP47883 348 aa6.88□□□□□ -1.31
CSRP1-218ENST00000533402 FUT6P51993 359 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms