RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TOMM40LQ969M1 308 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 ISOC1Q96CN7 298 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 S100A16Q96FQ6 103 aaKnown RBP9.64□□□□□ -0.87
SSBP3-214ENST00000533209 CABLES2Q9BTV7 478 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 PARP12Q9H0J9 701 aaKnown RBP9.64□□□□□ -0.87
SSBP3-214ENST00000533209 ABCB10Q9NRK6 738 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 C1RLQ9NZP8 487 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 OR1A1Q9P1Q5 309 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 TCF19Q9Y242 345 aa9.64□□□□□ -0.87
SSBP3-214ENST00000533209 IGKV1D-8A0A087WSZ0 117 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 HSD17B6O14756 317 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 XRCC3O43542 346 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 RGS11O94810 467 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 APOA1P02647 267 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 GSTT2BP0CG30 244 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 PTHLHP12272 177 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 CEACAM6P40199 344 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 KIR2DS4P43632 304 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 RAB7AP51149 207 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 GNG2P59768 71 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 PITPNAQ00169 270 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 RELBQ01201 579 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 ZNF816Q0VGE8 651 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-214ENST00000533209 KIR2DS1Q14954 304 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 CCDC144NLQ6NUI1 221 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 DYNC2LI1Q8TCX1 351 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 CFHR4Q92496 578 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 GCDHQ92947 438 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-214ENST00000533209 CMTM3Q96MX0 182 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 ABHD14AQ9BUJ0 271 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 TOLLIPQ9H0E2 274 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 SLC23A1Q9UHI7 598 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
SSBP3-214ENST00000533209 IGHV1-3A0A0C4DH29 117 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 FAM90A9PA6NNJ1 464 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 TIMM23O14925 209 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 HSPA12AO43301 675 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 CHST1O43916 411 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 HPGDSO60760 199 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
SSBP3-214ENST00000533209 GAPDHP04406 335 aaKnown RBP9.62□□□□□ -0.87
SSBP3-214ENST00000533209 CRYBA1P05813 215 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 ELK1P19419 428 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 ZBTB25P24278 435 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 CD24P25063 80 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 IL3RAP26951 378 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 BRS3P32247 399 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 MNDAP41218 407 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 REG1BP48304 166 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 COMPP49747 757 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-214ENST00000533209 ARHGDIBP52566 201 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 TAS2R20P59543 309 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 FBLN7Q53RD9 439 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 DHRS7BQ6IAN0 325 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-214ENST00000533209 MZT2AQ6P582 158 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 TMEM219Q86XT9 240 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 ODF3L1Q8IXM7 274 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 OR8H3Q8N146 312 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 OR2AK2Q8NG84 335 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 RTN4IP1Q8WWV3 396 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-214ENST00000533209 AP3S1Q92572 193 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 ST6GALNAC5Q9BVH7 336 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 RBM38Q9H0Z9 239 aaKnown RBP9.62□□□□□ -0.87
SSBP3-214ENST00000533209 IFI27L2Q9H2X8 130 aa9.62□□□□□ -0.87
SSBP3-214ENST00000533209 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 ITGB1BP1O14713 200 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 BET1O15155 118 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 ST8SIA5O15466 376 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 LANCL1O43813 399 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 NDUFA7O95182 113 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 DIRAS3O95661 229 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 HLA-DQB1P01920 261 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 SOX6P35712 828 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 HABP2Q14520 560 aaPredicted RBP9.61□□□□□ -0.87
SSBP3-214ENST00000533209 TMEM69Q5SWH9 247 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 Q6ZSV7 163 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 THNSL2Q86YJ6 484 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 LYG1Q8N1E2 194 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 DRAM1Q8N682 238 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 GVQW1Q8N7I0 195 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 OR56B4Q8NH76 319 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 C11orf54Q9H0W9 315 aaPredicted RBP9.61□□□□□ -0.87
SSBP3-214ENST00000533209 CCDC59Q9P031 241 aaKnown RBP9.61□□□□□ -0.87
SSBP3-214ENST00000533209 PITPNC1Q9UKF7 332 aa9.61□□□□□ -0.87
SSBP3-214ENST00000533209 MDKP21741 143 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-214ENST00000533209 OR3A3P47888 321 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 RAG2P55895 527 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 FOXL1Q12952 345 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 AWAT1Q58HT5 328 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 MOB3BQ86TA1 216 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 OR10J5Q8NHC4 309 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 SPATA3Q8NHX4 192 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 CAPSLQ8WWF8 208 aa9.6□□□□□ -0.87
SSBP3-214ENST00000533209 EDARADDQ8WWZ3 215 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms