RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 LINC00527Q9UJ94 153 aa18.48■□□□□ 0.55
SMPD1-209ENST00000533196 NAPSAO96009 420 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 CPEP16870 476 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 CRHBPP24387 322 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 MYCNOSP40205 109 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 HSPA13P48723 471 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 ZNF880Q6PDB4 577 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 TMEM91Q6ZNR0 172 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 C6orf201Q7Z4U5 140 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 MRAPQ8TCY5 172 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 TMEM203Q969S6 136 aa18.47■□□□□ 0.55
SMPD1-209ENST00000533196 SLC17A2O00624 439 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 HSMCR30P0CW71 290 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 BLVRBP30043 206 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-209ENST00000533196 SOX6P35712 828 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 PPP1CCP36873 323 aaKnown RBP18.46■□□□□ 0.55
SMPD1-209ENST00000533196 THBS3P49746 956 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 GNMTQ14749 295 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 FAM71F2Q6NXP2 309 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 SVOPQ8N4V2 548 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 CHCHD6Q9BRQ6 235 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 NICN1Q9BSH3 213 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 PLEKHJ1Q9NW61 149 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 STEAP1Q9UHE8 339 aa18.46■□□□□ 0.55
SMPD1-209ENST00000533196 TRBV6-6A0A0A6YYG2 114 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 LINC01548A6NM66 108 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 ARSBP15848 533 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 F2RL1P55085 397 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 ETV3LQ6ZN32 361 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 ZNF833PQ6ZTB9 187 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 MRPL41Q8IXM3 137 aaKnown RBP18.45■□□□□ 0.54
SMPD1-209ENST00000533196 ODF3L1Q8IXM7 274 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 FAM89BQ8N5H3 189 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 OR2AK2Q8NG84 335 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 CYYR1Q96J86 154 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 MCRIP2Q9BUT9 160 aaKnown RBP18.45■□□□□ 0.54
SMPD1-209ENST00000533196 CCDC90BQ9GZT6 254 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 LPAR5Q9H1C0 372 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 PLGRKTQ9HBL7 147 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 CHMP1AQ9HD42 196 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-209ENST00000533196 MGAT4AQ9UM21 535 aa18.45■□□□□ 0.54
SMPD1-209ENST00000533196 NUDT19A8MXV4 375 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 IGF1P05019 195 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 ELANEP08246 267 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 OR5H8P0DN80 308 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 PSMD7P51665 324 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 RPS25P62851 125 aaKnown RBP18.44■□□□□ 0.54
SMPD1-209ENST00000533196 FOXE3Q13461 319 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 CXorf66Q5JRM2 361 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-209ENST00000533196 ZNF695Q8IW36 515 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 RNF152Q8N8N0 203 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 KLHL30-AS1Q8NEE0 82 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 MGLLQ99685 303 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 NABP2Q9BQ15 211 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 GHITMQ9H3K2 345 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 PIPOXQ9P0Z9 390 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 BLOC1S6Q9UL45 172 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 HSF4Q9ULV5 492 aa18.44■□□□□ 0.54
SMPD1-209ENST00000533196 ITGB1BP1O14713 200 aa18.43■□□□□ 0.54
SMPD1-209ENST00000533196 C8orf86Q6ZUL3 223 aa18.43■□□□□ 0.54
SMPD1-209ENST00000533196 P2RX4Q99571 388 aa18.43■□□□□ 0.54
SMPD1-209ENST00000533196 GFI1Q99684 422 aa18.43■□□□□ 0.54
SMPD1-209ENST00000533196 ACOT13Q9NPJ3 140 aa18.43■□□□□ 0.54
SMPD1-209ENST00000533196 AK6Q9Y3D8 172 aaKnown RBP18.43■□□□□ 0.54
SMPD1-209ENST00000533196 A0A0A6YYD4 124 aa18.42■□□□□ 0.54
SMPD1-209ENST00000533196 VDAC1P21796 283 aa18.42■□□□□ 0.54
SMPD1-209ENST00000533196 MMDQ15546 238 aa18.42■□□□□ 0.54
SMPD1-209ENST00000533196 RAB11BQ15907 218 aa18.42■□□□□ 0.54
SMPD1-209ENST00000533196 DPF1Q92782 380 aa18.42■□□□□ 0.54
SMPD1-209ENST00000533196 MRPL20Q9BYC9 149 aaKnown RBP18.42■□□□□ 0.54
SMPD1-209ENST00000533196 KCNK15Q9H427 330 aa18.42■□□□□ 0.54
SMPD1-209ENST00000533196 ZNF107Q9UII5 783 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-209ENST00000533196 SAA2-SAA4A0A096LPE2 208 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 RAB29O14966 203 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 SAA2P0DJI9 122 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-209ENST00000533196 CDX1P47902 265 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-209ENST00000533196 ACTBP60709 375 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 CFHR3Q02985 330 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 EGFEM1PQ0D2K5 195 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 P2RY14Q15391 338 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 TBCEQ15813 527 aaPredicted RBP18.41■□□□□ 0.54
SMPD1-209ENST00000533196 IZUMO2Q6UXV1 221 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 C5orf24Q7Z6I8 188 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 IL1F10Q8WWZ1 152 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 HSPB9Q9BQS6 159 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 ZNF251Q9BRH9 671 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 IFI27L2Q9H2X8 130 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 SLC23A1Q9UHI7 598 aa18.41■□□□□ 0.54
SMPD1-209ENST00000533196 FOXI3A8MTJ6 420 aaPredicted RBP18.4■□□□□ 0.54
SMPD1-209ENST00000533196 SOCS1O15524 211 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 IGHG4P01861 327 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 CALRP27797 417 aaKnown RBP18.4■□□□□ 0.54
SMPD1-209ENST00000533196 FABP5Q01469 135 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 C18orf65Q6ZTR6 163 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 ZNF367Q7RTV3 350 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 SETD6Q8TBK2 473 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 AK3Q9UIJ7 227 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 V9GY05 133 aa18.4■□□□□ 0.54
SMPD1-209ENST00000533196 ERICH4A6NGS2 130 aa18.39■□□□□ 0.53
SMPD1-209ENST00000533196 NBR2O15453 112 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms