RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PSMB11A5LHX3 300 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 TRIM64CA6NLI5 447 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 TMEM14DPA8MWL7 114 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 M0QZK8 103 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 GAPDHP04406 335 aaKnown RBP14.04□□□□□ -0.16
SMG1-203ENST00000532700 PPP1CCP36873 323 aaKnown RBP14.04□□□□□ -0.16
SMG1-203ENST00000532700 RPS27AP62979 156 aaKnown RBP14.04□□□□□ -0.16
SMG1-203ENST00000532700 KHDC1LQ5JSQ8 128 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 FAM3DQ96BQ1 224 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 RITA1Q96K30 269 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 HSPB9Q9BQS6 159 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 URM1Q9BTM9 101 aaKnown RBP14.04□□□□□ -0.16
SMG1-203ENST00000532700 FAAP24Q9BTP7 215 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 PARP12Q9H0J9 701 aaKnown RBP14.04□□□□□ -0.16
SMG1-203ENST00000532700 GNG12Q9UBI6 72 aa14.04□□□□□ -0.16
SMG1-203ENST00000532700 LOC100506127A0A0U1RQW1 187 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 SHISA3A0PJX4 238 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 IFITM5A6NNB3 132 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 FGF16O43320 207 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 IGHG2P01859 326 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 GADD45AP24522 165 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 ZNF137PP52743 207 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 F2RL1P55085 397 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 PLA2G7Q13093 441 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 HES5Q5TA89 166 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 FOXB2Q5VYV0 432 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 WFDC9Q8NEX5 89 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 OR51D1Q8NGF3 324 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 OR4X2Q8NGF9 303 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 NEDD4LQ96PU5 975 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 HDHD3Q9BSH5 251 aaPredicted RBP14.03□□□□□ -0.16
SMG1-203ENST00000532700 TM2D1Q9BX74 207 aa14.03□□□□□ -0.16
SMG1-203ENST00000532700 AURKAIP1Q9NWT8 199 aaPredicted RBP14.03□□□□□ -0.16
SMG1-203ENST00000532700 SPINT2O43291 252 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 CA11O75493 328 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 PF4V1P10720 104 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 CLDN12P56749 244 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 OR10A3P58181 314 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 C2orf76Q3KRA6 126 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 MORN2Q502X0 79 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 SLC35E3Q7Z769 313 aa14.02□□□□□ -0.17
SMG1-203ENST00000532700 NOTOA8MTQ0 251 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 SERPINE3A8MV23 424 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 SNRPBP14678 240 aaKnown RBP14.01□□□□□ -0.17
SMG1-203ENST00000532700 CD33P20138 364 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 CNTFRP26992 372 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 GPR12P47775 334 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 OR3A3P47888 321 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 KRTAP10-11P60412 298 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 HMGN3Q15651 99 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 STPG2Q8N412 459 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 LINC00482Q8N8I6 264 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 YIPF6Q96EC8 236 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 DUX3Q96PT4 197 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 OR2S2Q9NQN1 319 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 RAB22AQ9UL26 194 aa14.01□□□□□ -0.17
SMG1-203ENST00000532700 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
SMG1-203ENST00000532700 FOXI3A8MTJ6 420 aaPredicted RBP14□□□□□ -0.17
SMG1-203ENST00000532700 SOCS1O15524 211 aa14□□□□□ -0.17
SMG1-203ENST00000532700 AIREO43918 545 aa14□□□□□ -0.17
SMG1-203ENST00000532700 CD1BP29016 333 aa14□□□□□ -0.17
SMG1-203ENST00000532700 SDC2P34741 201 aa14□□□□□ -0.17
SMG1-203ENST00000532700 RPL23AP62750 156 aaKnown RBP14□□□□□ -0.17
SMG1-203ENST00000532700 LSAMPQ13449 338 aa14□□□□□ -0.17
SMG1-203ENST00000532700 Q3ZCU0 254 aa14□□□□□ -0.17
SMG1-203ENST00000532700 C8orf86Q6ZUL3 223 aa14□□□□□ -0.17
SMG1-203ENST00000532700 TGIF2LXQ8IUE1 241 aa14□□□□□ -0.17
SMG1-203ENST00000532700 FAM71E2Q8N5Q1 922 aa14□□□□□ -0.17
SMG1-203ENST00000532700 OR2T10Q8NGZ9 312 aa14□□□□□ -0.17
SMG1-203ENST00000532700 S1PR3Q99500 378 aa14□□□□□ -0.17
SMG1-203ENST00000532700 MRPL20Q9BYC9 149 aaKnown RBP14□□□□□ -0.17
SMG1-203ENST00000532700 LPAR5Q9H1C0 372 aa14□□□□□ -0.17
SMG1-203ENST00000532700 ABCG5Q9H222 651 aa14□□□□□ -0.17
SMG1-203ENST00000532700 TMEM272A0A1B0GTI8 110 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 NAPSAO96009 420 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 MOSP00540 346 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 PF4P02776 101 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 BLVRBP30043 206 aaPredicted RBP13.99□□□□□ -0.17
SMG1-203ENST00000532700 MRPL41Q8IXM3 137 aaKnown RBP13.99□□□□□ -0.17
SMG1-203ENST00000532700 FAM89BQ8N5H3 189 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 CENPOQ9BU64 300 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 ABHD14AQ9BUJ0 271 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 MRPS26Q9BYN8 205 aaKnown RBP13.99□□□□□ -0.17
SMG1-203ENST00000532700 IFI27L2Q9H2X8 130 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 RAB9BQ9NP90 201 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 LIN7CQ9NUP9 197 aaKnown RBP13.99□□□□□ -0.17
SMG1-203ENST00000532700 PLEKHJ1Q9NW61 149 aa13.99□□□□□ -0.17
SMG1-203ENST00000532700 LDLRAD4O15165 306 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 LANCL1O43813 399 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 RPLP1P05386 114 aaKnown RBP13.98□□□□□ -0.17
SMG1-203ENST00000532700 SMIM18P0DKX4 95 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 RAB6AP20340 208 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 IL3RAP26951 378 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 CFHR3Q02985 330 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 ZNF880Q6PDB4 577 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 TRAT1Q6PIZ9 186 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 NR2C2APQ86WQ0 139 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 OR56B1Q8NGI3 324 aa13.98□□□□□ -0.17
SMG1-203ENST00000532700 CHPT1Q8WUD6 406 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms