RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PTX4Q96A99 478 aa15.02■□□□□ -0
SSH3-209ENST00000532600 RBMXL1Q96E39 390 aaKnown RBP15.02■□□□□ -0
SSH3-209ENST00000532600 ARHGAP5-AS1Q96IT6 56 aa15.02■□□□□ -0
SSH3-209ENST00000532600 OR4F4Q96R69 305 aa15.02■□□□□ -0
SSH3-209ENST00000532600 FAAP24Q9BTP7 215 aa15.02■□□□□ -0
SSH3-209ENST00000532600 RBM38Q9H0Z9 239 aaKnown RBP15.02■□□□□ -0
SSH3-209ENST00000532600 ETAA1Q9NY74 926 aa15.02■□□□□ -0
SSH3-209ENST00000532600 MOB4Q9Y3A3 225 aa15.02■□□□□ -0
SSH3-209ENST00000532600 IGHV3-43A0A0B4J1X8 118 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 GLAP06280 429 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 IGHV3-43DP0DP04 118 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 GZMHP20718 246 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 TMBIM6P55061 237 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 C5orf56Q8N8D9 126 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 NEK7Q8TDX7 302 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 ARL11Q969Q4 196 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 ST6GALNAC6Q969X2 333 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 NEDD4LQ96PU5 975 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 GFOD1Q9NXC2 390 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 KCNK7Q9Y2U2 307 aa15.01□□□□□ -0.01
SSH3-209ENST00000532600 C12orf77C9JDV5 145 aa15□□□□□ -0.01
SSH3-209ENST00000532600 M0QZK8 103 aa15□□□□□ -0.01
SSH3-209ENST00000532600 HSD17B6O14756 317 aa15□□□□□ -0.01
SSH3-209ENST00000532600 SLC31A2O15432 143 aa15□□□□□ -0.01
SSH3-209ENST00000532600 ORC5O43913 435 aa15□□□□□ -0.01
SSH3-209ENST00000532600 IGKV1D-33P01593 117 aa15□□□□□ -0.01
SSH3-209ENST00000532600 IGKV1-33P01594 117 aa15□□□□□ -0.01
SSH3-209ENST00000532600 REG1BP48304 166 aa15□□□□□ -0.01
SSH3-209ENST00000532600 RAB7AP51149 207 aa15□□□□□ -0.01
SSH3-209ENST00000532600 ZNF816Q0VGE8 651 aaPredicted RBP15□□□□□ -0.01
SSH3-209ENST00000532600 HNF4GQ14541 408 aa15□□□□□ -0.01
SSH3-209ENST00000532600 C9orf152Q5JTZ5 239 aa15□□□□□ -0.01
SSH3-209ENST00000532600 C5orf24Q7Z6I8 188 aa15□□□□□ -0.01
SSH3-209ENST00000532600 OR8H3Q8N146 312 aa15□□□□□ -0.01
SSH3-209ENST00000532600 LINC00311Q8N616 119 aa15□□□□□ -0.01
SSH3-209ENST00000532600 WFDC9Q8NEX5 89 aa15□□□□□ -0.01
SSH3-209ENST00000532600 OR52M1Q8NGK5 317 aa15□□□□□ -0.01
SSH3-209ENST00000532600 RAB2BQ8WUD1 216 aa15□□□□□ -0.01
SSH3-209ENST00000532600 ISOC1Q96CN7 298 aa15□□□□□ -0.01
SSH3-209ENST00000532600 HDHD3Q9BSH5 251 aaPredicted RBP15□□□□□ -0.01
SSH3-209ENST00000532600 PECRQ9BY49 303 aa15□□□□□ -0.01
SSH3-209ENST00000532600 IGHV1-3A0A0C4DH29 117 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 TCRBV4S1A1TA0A5B7 111 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 H3BMQ9 156 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 SDCBPO00560 298 aaPredicted RBP14.99□□□□□ -0.01
SSH3-209ENST00000532600 TMEM11P17152 192 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 RANBP1P43487 201 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 ZNF134P52741 427 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 EBI3Q14213 229 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 CROCCP3Q8IVE0 287 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 Q8N6K4 173 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 C8orf31Q8N9H6 132 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 ZNF439Q8NDP4 499 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 OR56B1Q8NGI3 324 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 OR10R2Q8NGX6 335 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 OR10X1Q8NGY0 326 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 OR4K15Q8NH41 348 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 MRPL30Q8TCC3 161 aaKnown RBP14.99□□□□□ -0.01
SSH3-209ENST00000532600 ATG5Q9H1Y0 275 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 PLEKHJ1Q9NW61 149 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 RHBDL2Q9NX52 303 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 ABRACLQ9P1F3 81 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 AK3Q9UIJ7 227 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 HSF4Q9ULV5 492 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 SPATA2Q9UM82 520 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 ETV7Q9Y603 341 aa14.99□□□□□ -0.01
SSH3-209ENST00000532600 IGHV3-72A0A0B4J1Y9 119 aa14.98□□□□□ -0.01
SSH3-209ENST00000532600 LINC01548A6NM66 108 aa14.98□□□□□ -0.01
SSH3-209ENST00000532600 SCAND1P57086 179 aa14.98□□□□□ -0.01
SSH3-209ENST00000532600 OR1L1Q8NH94 360 aa14.98□□□□□ -0.01
SSH3-209ENST00000532600 PHF21AQ96BD5 680 aa14.98□□□□□ -0.01
SSH3-209ENST00000532600 NOL4LQ96MY1 436 aaPredicted RBP14.98□□□□□ -0.01
SSH3-209ENST00000532600 BCL7BQ9BQE9 202 aa14.98□□□□□ -0.01
SSH3-209ENST00000532600 ELF5Q9UKW6 265 aaPredicted RBP14.98□□□□□ -0.01
SSH3-209ENST00000532600 TSSC4Q9Y5U2 329 aaPredicted RBP14.98□□□□□ -0.01
SSH3-209ENST00000532600 MFNGO00587 321 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 TMEM127O75204 238 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 NAPSAO96009 420 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 IGLL1P15814 213 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 GNB3P16520 340 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 RCC1P18754 421 aaPredicted RBP14.97□□□□□ -0.01
SSH3-209ENST00000532600 HES1Q14469 280 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 ZNF329Q86UD4 541 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 RAB3CQ96E17 227 aa14.97□□□□□ -0.01
SSH3-209ENST00000532600 EAF1Q96JC9 268 aaPredicted RBP14.97□□□□□ -0.01
SSH3-209ENST00000532600 ZNF736B4DX44 427 aaPredicted RBP14.96□□□□□ -0.01
SSH3-209ENST00000532600 FGF16O43320 207 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 CA11O75493 328 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 HIST1H1DP16402 221 aaKnown RBP14.96□□□□□ -0.01
SSH3-209ENST00000532600 RORCP51449 518 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 CT45A1Q5HYN5 189 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 C18orf65Q6ZTR6 163 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 MOB3BQ86TA1 216 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 IZUMO1Q8IYV9 350 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 OR4X2Q8NGF9 303 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 CT45A3Q8NHU0 189 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 DYNC2LI1Q8TCX1 351 aa14.96□□□□□ -0.01
SSH3-209ENST00000532600 RTN4IP1Q8WWV3 396 aaPredicted RBP14.96□□□□□ -0.01
SSH3-209ENST00000532600 MBNL3Q9NUK0 354 aaKnown RBP14.96□□□□□ -0.01
SSH3-209ENST00000532600 LINC00527Q9UJ94 153 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms