RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MRPS14O60783 128 aaKnown RBP17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 ARL6IP5O75915 188 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 ELANEP08246 267 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 UBBP0CG47 229 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 CPEP16870 476 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 GP2P55259 537 aaKnown RBP17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 GABARAPL2P60520 117 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 TBCEQ15813 527 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 NKAPLQ5M9Q1 402 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 ZNF367Q7RTV3 350 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 SVOPQ8N4V2 548 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 OR52L2PQ8NGH6 319 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 DUX3Q96PT4 197 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 NEDD4LQ96PU5 975 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 LRRC42Q9Y546 428 aa17.5■□□□□ 0.39
TRAPPC4-210ENST00000531290 VAX1Q5SQQ9 334 aa17.49■□□□□ 0.39
TRAPPC4-210ENST00000531290 FAM71E2Q8N5Q1 922 aa17.49■□□□□ 0.39
TRAPPC4-210ENST00000531290 RAX2Q96IS3 184 aa17.49■□□□□ 0.39
TRAPPC4-210ENST00000531290 HSPB9Q9BQS6 159 aa17.49■□□□□ 0.39
TRAPPC4-210ENST00000531290 ABHD14AQ9BUJ0 271 aa17.49■□□□□ 0.39
TRAPPC4-210ENST00000531290 YTHDF1Q9BYJ9 559 aaKnown RBP17.49■□□□□ 0.39
TRAPPC4-210ENST00000531290 JPT1Q9UK76 154 aa17.49■□□□□ 0.39
TRAPPC4-210ENST00000531290 RGS11O94810 467 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 UCHL1P09936 223 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 CDX1P47902 265 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 HTD2P86397 168 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 LSAMPQ13449 338 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 GNMTQ14749 295 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 KIR2DS1Q14954 304 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 FAM27D1Q5T7N8 215 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 LCNL1Q6ZST4 164 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 OR8U1Q8NH10 309 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 MRPL30Q8TCC3 161 aaKnown RBP17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 GALMQ96C23 342 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 RBMXL1Q96E39 390 aaKnown RBP17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 ACOT13Q9NPJ3 140 aa17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 ZNF107Q9UII5 783 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC4-210ENST00000531290 OR5H8P0DN80 308 aa17.47■□□□□ 0.39
TRAPPC4-210ENST00000531290 PPP1CCP36873 323 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-210ENST00000531290 RPS25P62851 125 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-210ENST00000531290 MMDQ15546 238 aa17.47■□□□□ 0.39
TRAPPC4-210ENST00000531290 RNF152Q8N8N0 203 aa17.47■□□□□ 0.39
TRAPPC4-210ENST00000531290 ABRACLQ9P1F3 81 aa17.47■□□□□ 0.39
TRAPPC4-210ENST00000531290 YPEL1O60688 119 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 IGHG4P01861 327 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 IGF1P05019 195 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 SLC2A2P11168 524 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 RANBP1P43487 201 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 DGCR2P98153 550 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 CD69Q07108 199 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 DCTN2Q13561 401 aaKnown RBP17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 OR10K2Q6IF99 312 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 C5orf24Q7Z6I8 188 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 OR5M8Q8NGP6 311 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 CYYR1Q96J86 154 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 KCTD7Q96MP8 289 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 YPEL2Q96QA6 119 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 ZNF251Q9BRH9 671 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 FAAP24Q9BTP7 215 aa17.46■□□□□ 0.39
TRAPPC4-210ENST00000531290 VSIG8P0DPA2 414 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 CHATP28329 748 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 HTR2CP28335 458 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 ACTBP60709 375 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 CFHR3Q02985 330 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 DEFB136Q30KP8 78 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 LRRTM1Q86UE6 522 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 OR2AK2Q8NG84 335 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 KCNG3Q8TAE7 436 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 SULT4A1Q9BR01 284 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 CHCHD6Q9BRQ6 235 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 TMEM59Q9BXS4 323 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 PLGRKTQ9HBL7 147 aa17.45■□□□□ 0.38
TRAPPC4-210ENST00000531290 RPS27AP62979 156 aaKnown RBP17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 LY6G6FQ5SQ64 297 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 C1orf100Q5SVJ3 147 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 C6orf201Q7Z4U5 140 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 OR6M1Q8NGM8 313 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 IL1F10Q8WWZ1 152 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 NABP2Q9BQ15 211 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 MRPL20Q9BYC9 149 aaKnown RBP17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 CHMP1AQ9HD42 196 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 STEAP1Q9UHE8 339 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 ZNF580Q9UK33 172 aa17.44■□□□□ 0.38
TRAPPC4-210ENST00000531290 RAMP3O60896 148 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 CALRP27797 417 aaKnown RBP17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 PSMD7P51665 324 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 TMEM65Q6PI78 240 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 TMEM91Q6ZNR0 172 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 ODF3L1Q8IXM7 274 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 C4orf3Q8WVX3 66 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 FCGR1BQ92637 280 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 WSB1Q9Y6I7 421 aa17.43■□□□□ 0.38
TRAPPC4-210ENST00000531290 PSMB8P28062 276 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 OR3A3P47888 321 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 FABP5Q01469 135 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 HMGN3Q15651 99 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 C9orf66Q5T8R8 295 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 ZNF833PQ6ZTB9 187 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 SPARTQ8N0X7 666 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 SETD6Q8TBK2 473 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms