RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 MEX3BQ6ZN04 569 aaKnown RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 ZNF66Q6ZN08 573 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 SEM1Q6ZVN7 128 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 MYPOPQ86VE0 399 aaPredicted RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 STX12Q86Y82 276 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 SVBPQ8N300 66 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 ZNF645Q8N7E2 425 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 RBMXL3Q8N7X1 1067 aaKnown RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 NUP37Q8NFH4 326 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 DMBX1Q8NFW5 382 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 OR1S2Q8NGQ3 325 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 OR11L1Q8NGX0 322 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 LYPD6BQ8NI32 183 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 LHFPL5Q8TAF8 219 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 C17orf50Q8WW18 174 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 NINJ1Q92982 152 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 ZNF488Q96MN9 340 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 PARD6GQ9BYG4 376 aaPredicted RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 OR51B6Q9H340 312 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 CCL28Q9NRJ3 127 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 ASF1BQ9NVP2 202 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 IL36RNQ9UBH0 155 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 ERRFI1Q9UJM3 462 aaPredicted RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 TINAGQ9UJW2 476 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 ZDHHC8Q9ULC8 765 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 RNF150Q9ULK6 438 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 RCL1Q9Y2P8 373 aaKnown RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 CARHSP1Q9Y2V2 147 aaKnown RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 FAM215AQ9Y5M1 114 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 WSB1Q9Y6I7 421 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 EP300Q09472 2414 aaPredicted RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 ESPL1Q14674 2120 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 A0A0C4DFX4 3053 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 A0A1B0GW64 132 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 A0A1W2PR80 420 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 TMEM218A2RU14 115 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 FAM90A9PA6NNJ1 464 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 VSTM5A8MXK1 200 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 LGALS8O00214 317 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 SIRPB1O00241 398 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 HSPB6O14558 160 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 TOR1AO14656 332 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 HSD17B6O14756 317 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 MGST3O14880 152 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 ADAM20O43506 726 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 SOX15O60248 233 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 SNAPINO95295 136 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 OR8U8P0C7N1 319 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 DANCRP0C864 163 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 GLI4P10075 376 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 PTAFRP25105 342 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 IL2RGP31785 369 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 ERVS71-1P61550 626 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 HBG1P69891 147 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 HBG2P69892 147 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 NKX6-1P78426 367 aaPredicted RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 EWSR1Q01844 656 aaKnown RBP eCLIP4.66□□□□□ -1.66
PCF11-205ENST00000530906 RBPJQ06330 500 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 FAM209AQ5JX71 171 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 PXDC1Q5TGL8 231 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 BTNL8Q6UX41 500 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 FOXRED2Q8IWF2 684 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 C11orf53Q8IXP5 236 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 OR52M1Q8NGK5 317 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 RNASE11Q8TAA1 199 aaKnown RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 PLPPR1Q8TBJ4 325 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 Q8TCH9 128 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 PCNPQ8WW12 178 aaKnown RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 CYYR1Q96J86 154 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 SNX22Q96L94 193 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 LINC00052Q96N35 136 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 CIB3Q96Q77 187 aaPredicted RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 TSNAXQ99598 290 aaKnown RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 HSD17B10Q99714 261 aaKnown RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 LRFN3Q9BTN0 628 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 PBDC1Q9BVG4 233 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 SEC11CQ9BY50 192 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 FAM234AQ9H0X4 552 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 OPN3Q9H1Y3 402 aaPredicted RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 NARFLQ9H6Q4 476 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 NGBQ9NPG2 151 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 OR2S2Q9NQN1 319 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 OR6C3Q9NZP0 311 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 JPT1Q9UK76 154 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 GAB2Q9UQC2 676 aa4.66□□□□□ -1.66
PCF11-205ENST00000530906 RBM7Q9Y580 266 aaKnown RBP4.66□□□□□ -1.66
PCF11-205ENST00000530906 INTS1Q8N201 2190 aaKnown RBP4.65□□□□□ -1.66
PCF11-205ENST00000530906 ZSCAN5BA6NJL1 495 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 A8MXE2 369 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 C12orf77C9JDV5 145 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 RBFOX2O43251 390 aaKnown RBP eCLIP4.65□□□□□ -1.67
PCF11-205ENST00000530906 AGFG2O95081 481 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 IFNA5P01569 189 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 HBZP02008 142 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 HBE1P02100 147 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 APOC3P02656 99 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 PRDX2P32119 198 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 CEACAM6P40199 344 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 KIR2DS2P43631 304 aa4.65□□□□□ -1.67
PCF11-205ENST00000530906 OR3A1P47881 315 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms