RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ELF5Q9UKW6 265 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-218ENST00000529566 IGKV1-6A0A0C4DH72 117 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 SERPINE3A8MV23 424 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 SNRNP70P08621 437 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 SCAND1P57086 179 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 LSM3P62310 102 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 HLA-DRB3P79483 266 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 EBI3Q14213 229 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 IDNKQ5T6J7 187 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 CAPSLQ8WWF8 208 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 IL1F10Q8WWZ1 152 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 SLC25A38Q96DW6 304 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 ABHD14AQ9BUJ0 271 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 PARP12Q9H0J9 701 aaKnown RBP12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 MGAT4AQ9UM21 535 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 CMYA5Q8N3K9 4069 aa12.87□□□□□ -0.35
TSPAN4-218ENST00000529566 TRDCB7Z8K6 153 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 LANCL1O43813 399 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 FCGR3AP08637 254 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 CD3GP09693 182 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 IL3RAP26951 378 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 HERPUD1Q15011 391 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 CDNFQ49AH0 187 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 OR2T6Q8NHC8 308 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 AGMATQ9BSE5 352 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 SLC25A33Q9BSK2 321 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 PRSS22Q9GZN4 317 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 IFI27L2Q9H2X8 130 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 RHBDL2Q9NX52 303 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 OR1A1Q9P1Q5 309 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 ETV7Q9Y603 341 aa12.86□□□□□ -0.35
TSPAN4-218ENST00000529566 A0A075B6Q4 140 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 ITGB1BP1O14713 200 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 TMEM127O75204 238 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 RGS11O94810 467 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 NCS1P62166 190 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 MOB3BQ86TA1 216 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 IZUMO1Q8IYV9 350 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 LYG1Q8N1E2 194 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 Q8N6K4 173 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 DTX3Q8N9I9 347 aa12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 RBMXL1Q96E39 390 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 ZNF230Q9UIE0 474 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-218ENST00000529566 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 IGHV3-72A0A0B4J1Y9 119 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 ZNF736B4DX44 427 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 IGKV1D-33P01593 117 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 IGKV1-33P01594 117 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 TFAP2AP05549 437 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 CD1BP29016 333 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 CEACAM6P40199 344 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 OR3A3P47888 321 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 ALDH3B2P48448 385 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 ZNF260Q3ZCT1 412 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 HACD4Q5VWC8 232 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 C11orf88Q6PI97 169 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 Q6ZS49 121 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 ZNF833PQ6ZTB9 187 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 TGIF2LXQ8IUE1 241 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 OR2AK2Q8NG84 335 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 EAF1Q96JC9 268 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 ZNF251Q9BRH9 671 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 MRPS26Q9BYN8 205 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 WNT10AQ9GZT5 417 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 TOLLIPQ9H0E2 274 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 C11orf54Q9H0W9 315 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 SLC23A1Q9UHI7 598 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 SPATA2Q9UM82 520 aa12.84□□□□□ -0.35
TSPAN4-218ENST00000529566 IGKV1D-8A0A087WSZ0 117 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 ST8SIA5O15466 376 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 FABP7O15540 132 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 TXNL1O43396 289 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 SCGNO76038 276 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 GSTP1P09211 210 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 GSTT2P0CG29 244 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 GSTT2BP0CG30 244 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 TMEM11P17152 192 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 ZBTB25P24278 435 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 VBP1P61758 197 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 HNF4GQ14541 408 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 ARL6IP1Q15041 203 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 CTF1Q16619 201 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 IGSF11Q5DX21 431 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 CROCCP3Q8IVE0 287 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 KLHDC1Q8N7A1 406 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 OR4A4PQ8NGN8 299 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 MAFIPQ8WZ33 124 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 SLC25A46Q96AG3 418 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 AKR1E2Q96JD6 320 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 CABLES2Q9BTV7 478 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 NAA50Q9GZZ1 169 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 PLSCR3Q9NRY6 295 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 PKD1L1Q8TDX9 2849 aa12.83□□□□□ -0.36
TSPAN4-218ENST00000529566 SAA2-SAA4A0A096LPE2 208 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 TMEM235A6NFC5 223 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms