RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR2S2Q9NQN1 319 aa8.26□□□□□ -1.09
CPSF1-203ENST00000527916 PLSCR3Q9NRY6 295 aa8.26□□□□□ -1.09
CPSF1-203ENST00000527916 GNG12Q9UBI6 72 aa8.26□□□□□ -1.09
CPSF1-203ENST00000527916 JPT1Q9UK76 154 aa8.26□□□□□ -1.09
CPSF1-203ENST00000527916 UBE2QL1A1L167 161 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 SERPINE3A8MV23 424 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 SEC14L6B5MCN3 397 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 SLC22A1O15245 554 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 SLC31A2O15432 143 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 YPEL1O60688 119 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 LY86O95711 162 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 BPNT1O95861 308 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 MYF6P23409 242 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 PSMA1P25786 263 aaKnown RBP8.25□□□□□ -1.09
CPSF1-203ENST00000527916 RANBP1P43487 201 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 REG1BP48304 166 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 AQP4P55087 323 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 RPS27AP62979 156 aaKnown RBP8.25□□□□□ -1.09
CPSF1-203ENST00000527916 QRFPP83859 136 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 INSL4Q14641 139 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 TRAM1Q15629 374 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 HSD17B12Q53GQ0 312 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 RBM48Q5RL73 367 aaKnown RBP8.25□□□□□ -1.09
CPSF1-203ENST00000527916 FAM27D1Q5T7N8 215 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 FAM53AQ6NSI3 398 aaPredicted RBP8.25□□□□□ -1.09
CPSF1-203ENST00000527916 SBSPONQ8IVN8 264 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 STPG2Q8N412 459 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 OR1L1Q8NH94 360 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 UBALD1Q8TB05 177 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 MRPL30Q8TCC3 161 aaKnown RBP8.25□□□□□ -1.09
CPSF1-203ENST00000527916 NRG4Q8WWG1 115 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 UFD1Q92890 307 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 FAM46BQ96A09 425 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 GALMQ96C23 342 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 YPEL2Q96QA6 119 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 TMED9Q9BVK6 235 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 GON7Q9BXV9 100 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 ANKRD60Q9BZ19 345 aa8.25□□□□□ -1.09
CPSF1-203ENST00000527916 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 IGHV3-72A0A0B4J1Y9 119 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 NCBP2LA6PVI3 153 aaKnown RBP8.24□□□□□ -1.09
CPSF1-203ENST00000527916 TMEM14DPA8MWL7 114 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 AP4M1O00189 453 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 JTBO76095 146 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 RGS11O94810 467 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 CPEP16870 476 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 HTR2CP28335 458 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 TEX38Q6PEX7 206 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 C18orf65Q6ZTR6 163 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 OR6M1Q8NGM8 313 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 OR8U1Q8NH10 309 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 ISOC1Q96CN7 298 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 RAX2Q96IS3 184 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 NOL4LQ96MY1 436 aaPredicted RBP8.24□□□□□ -1.09
CPSF1-203ENST00000527916 DUX3Q96PT4 197 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 S1PR3Q99500 378 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 CHCHD6Q9BRQ6 235 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 FAAP24Q9BTP7 215 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 TMEM59Q9BXS4 323 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 RIMS4Q9H426 269 aaPredicted RBP8.24□□□□□ -1.09
CPSF1-203ENST00000527916 ZNF580Q9UK33 172 aa8.24□□□□□ -1.09
CPSF1-203ENST00000527916 TRBV6-6A0A0A6YYG2 114 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 LINC01548A6NM66 108 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 ZNF736B4DX44 427 aaPredicted RBP8.23□□□□□ -1.09
CPSF1-203ENST00000527916 SLC17A2O00624 439 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 RGS10O43665 173 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 ARL6IP5O75915 188 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 NAPSAO96009 420 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 CRHBPP24387 322 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 GPR12P47775 334 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 MLLT11Q13015 90 aaPredicted RBP8.23□□□□□ -1.09
CPSF1-203ENST00000527916 UNC119Q13432 240 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 LSAMPQ13449 338 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 HMGN3Q15651 99 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 PNLIPRP3Q17RR3 467 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 LIPKQ5VXJ0 399 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 OR10K2Q6IF99 312 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 ZNF880Q6PDB4 577 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 ADAMTSL5Q6ZMM2 481 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 TMEM91Q6ZNR0 172 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 PRSS48Q7RTY5 328 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 C6orf201Q7Z4U5 140 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 ODF3L1Q8IXM7 274 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 FAM89BQ8N5H3 189 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 FAM71E2Q8N5Q1 922 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 RNF152Q8N8N0 203 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 OR52L2PQ8NGH6 319 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 OR10V1Q8NGI7 309 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 RASL11BQ9BPW5 248 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 SULT4A1Q9BR01 284 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 URM1Q9BTM9 101 aaKnown RBP8.23□□□□□ -1.09
CPSF1-203ENST00000527916 ABHD14AQ9BUJ0 271 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 VCX3BQ9H321 246 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 GHITMQ9H3K2 345 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 SCOCQ9UIL1 159 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 HSF4Q9ULV5 492 aa8.23□□□□□ -1.09
CPSF1-203ENST00000527916 ITGB1BP1O14713 200 aa8.22□□□□□ -1.09
CPSF1-203ENST00000527916 RRP9O43818 475 aaKnown RBP8.22□□□□□ -1.09
CPSF1-203ENST00000527916 IGF1P05019 195 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms