RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 PLA2G10O15496 165 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 XRCC3O43542 346 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 HLA-DQB1P01920 261 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 VPREB1P12018 145 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 ZNF35P13682 527 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CA6P23280 308 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CHATP28329 748 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 PTGFRP43088 359 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 NR4A2P43354 598 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 INPP1P49441 399 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 SRP9P49458 86 aaKnown RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 COMPP49747 757 aaPredicted RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 RBP2P50120 134 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CNN1P51911 297 aaKnown RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 NKX2-5P52952 324 aaPredicted RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 ATP1B3P54709 279 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 ZP1P60852 638 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 QRFPP83859 136 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 PSG7Q13046 419 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 VAMP3Q15836 100 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 TATDN3Q17R31 274 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 OLFML2AQ68BL7 652 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CLEC18BQ6UXF7 455 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 BAIAP2L2Q6UXY1 529 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 FBXW12Q6X9E4 464 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 OR2W3Q7Z3T1 314 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 ERASQ7Z444 233 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CALHM1Q8IU99 346 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 ZFP82Q8N141 532 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 NECAP1Q8NC96 275 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CLEC18CQ8NCF0 446 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CHST4Q8NCG5 386 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 OR4C5Q8NGB2 326 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 OR2D3Q8NGH3 330 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 OR5L1Q8NGL2 311 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 OCC1Q8TAD7 63 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 KLF14Q8TD94 323 aaPredicted RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 CHPT1Q8WUD6 406 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 SMIM4Q8WVI0 70 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 NUDCD2Q8WVJ2 157 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 HPSE2Q8WWQ2 592 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CACNG8Q8WXS5 425 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 YIPF5Q969M3 257 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 ST6GALNAC6Q969X2 333 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 MSI2Q96DH6 328 aaKnown RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 BORCS8Q96FH0 119 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 WFIKKN1Q96NZ8 548 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 DUX5Q96PT3 197 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 NEDD4LQ96PU5 975 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 ZNF251Q9BRH9 671 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 TMEM59Q9BXS4 323 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 MAGT1Q9H0U3 335 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 LPAR5Q9H1C0 372 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 FAIMQ9NVQ4 179 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 CISD1Q9NZ45 108 aaKnown RBP3.5□□□□□ -1.85
CD44-226ENST00000527889 ZNF581Q9P0T4 197 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 RAB22AQ9UL26 194 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 SLC7A11Q9UPY5 501 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 URGCP-MRPS24S4R325 110 aa3.5□□□□□ -1.85
CD44-226ENST00000527889 RYR3Q15413 4870 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 IGKV1-12A0A0C4DH73 117 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 A0A1W2PPQ1 181 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PQLC2LA1A4F0 135 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 METTL21EPA6NDL7 271 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 IQCF6A8MYZ5 107 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ZNF732B4DXR9 585 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 F8VVB4 439 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 F8VWA3 439 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 GABARAPH6UMI1 98 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 TRIM77I1YAP6 450 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 CTDSPLO15194 276 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SLC31A2O15432 143 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SOCS1O15524 211 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 MLNRO43193 412 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 LYRM1O43325 122 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 GSTZ1O43708 216 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 SYNGR1O43759 233 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ORC5O43913 435 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 TIMM8AO60220 97 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 RBMXL2O75526 392 aaKnown RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 PTTG1O95997 202 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 CST4P01036 141 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 IGKV1D-12P01611 117 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 MT-ND4P03905 459 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SFTPBP07988 381 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 NHLRC4P0CG21 123 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 UBBP0CG47 229 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PET100P0DJ07 73 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 RRASP10301 218 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 MGMTP16455 207 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 GNB3P16520 340 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SELEP16581 610 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 BCL3P20749 454 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 GABRR1P24046 479 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PRSS3P35030 304 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 MAS1LP35410 378 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 MNDAP41218 407 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 UQCRFS1P47985 274 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms