RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 IGHV3-64DA0A0J9YX35 117 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 WNT9BO14905 357 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 NXPH3O95157 252 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 IL2RGP31785 369 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 OR3A1P47881 315 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 CEBPDP49716 269 aaPredicted RBP12.9□□□□□ -0.34
USH1C-207ENST00000527720 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 SLC35B3Q9H1N7 401 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 OPN3Q9H1Y3 402 aaPredicted RBP12.9□□□□□ -0.34
USH1C-207ENST00000527720 SMCO4Q9NRQ5 59 aa12.9□□□□□ -0.34
USH1C-207ENST00000527720 IFNA5P01569 189 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 NFYBP25208 207 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 FABP6P51161 128 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 TRAT1Q6PIZ9 186 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 TCTEX1D1Q8N7M0 179 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 OR1L1Q8NH94 360 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 LURAP1Q96LR2 239 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 SLC25A15Q9Y619 301 aa12.9□□□□□ -0.35
USH1C-207ENST00000527720 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
USH1C-207ENST00000527720 PPP1CCP36873 323 aaKnown RBP12.89□□□□□ -0.35
USH1C-207ENST00000527720 PRAMEF6Q5VXH4 476 aa12.89□□□□□ -0.35
USH1C-207ENST00000527720 UBALD1Q8TB05 177 aa12.89□□□□□ -0.35
USH1C-207ENST00000527720 NINJ1Q92982 152 aa12.89□□□□□ -0.35
USH1C-207ENST00000527720 COQ2Q96H96 371 aa12.89□□□□□ -0.35
USH1C-207ENST00000527720 SEBOXQ9HB31 216 aaPredicted RBP12.89□□□□□ -0.35
USH1C-207ENST00000527720 MMP24Q9Y5R2 645 aa12.89□□□□□ -0.35
USH1C-207ENST00000527720 TTC28Q96AY4 2481 aa12.89□□□□□ -0.35
USH1C-207ENST00000527720 HBZP02008 142 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 TLE4Q04727 773 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 AESQ08117 197 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 CATR1Q13166 79 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
USH1C-207ENST00000527720 C3orf36Q3SXR2 165 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 AKR1C8PQ5T2L2 129 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 SP5Q6BEB4 398 aaPredicted RBP12.88□□□□□ -0.35
USH1C-207ENST00000527720 SEM1Q6ZVN7 128 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 KCNJ16Q9NPI9 418 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 PSENENQ9NZ42 101 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 KIAA1456Q9P272 454 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 PRELID3BQ9Y3B1 194 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 RTP5Q14D33 572 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 FAM90A1Q86YD7 464 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 FGFRL1Q8N441 504 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 MSL2Q9HCI7 577 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 MLXQ9UH92 298 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 FRYQ5TBA9 3013 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 PRR14LQ5THK1 2151 aa12.88□□□□□ -0.35
USH1C-207ENST00000527720 TSPAN9O75954 239 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 PTBP3O95758 552 aaKnown RBP12.87□□□□□ -0.35
USH1C-207ENST00000527720 HBE1P02100 147 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 OR8U8P0C7N1 319 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 GABRA2P47869 451 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 RAB2AP61019 212 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 HBG1P69891 147 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 HBG2P69892 147 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 COL10A1Q03692 680 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 KRBOX4Q5JUW0 171 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
USH1C-207ENST00000527720 OR2D2Q9H210 308 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 FBXO7Q9Y3I1 522 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 RBFOX3A6NFN3 312 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 TIMM23BQ5SRD1 257 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 FAM216AQ8WUB2 273 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 RBMXL1Q96E39 390 aaKnown RBP12.87□□□□□ -0.35
USH1C-207ENST00000527720 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
USH1C-207ENST00000527720 UFSP2Q9NUQ7 469 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 RNF150Q9ULK6 438 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 FZR1Q9UM11 496 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 RFNGQ9Y644 331 aa12.87□□□□□ -0.35
USH1C-207ENST00000527720 EP300Q09472 2414 aaPredicted RBP12.87□□□□□ -0.35
USH1C-207ENST00000527720 H3BP45 60 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 CFHR2P36980 270 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 RUNX1Q01196 453 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 TMEM267Q0VDI3 215 aaPredicted RBP12.86□□□□□ -0.35
USH1C-207ENST00000527720 SLC25A24Q6NUK1 477 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 Q6ZS92 163 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 OR52L2PQ8NGH6 319 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 PSMG3Q9BT73 122 aaPredicted RBP12.86□□□□□ -0.35
USH1C-207ENST00000527720 ABHD14AQ9BUJ0 271 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 PRELID1Q9Y255 219 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 CACNA1DQ01668 2161 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 TRAV1-1A0A0B4J248 108 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 GPR37O15354 613 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 P0C879 139 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 HTD2P86397 168 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 RHEBQ15382 184 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 AWAT1Q58HT5 328 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 AVPI1Q5T686 147 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 SCGB1C1Q8TD33 95 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 MRGPRDQ8TDS7 321 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 LRRC29Q8WV35 223 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 LAMP3Q9UQV4 416 aa12.86□□□□□ -0.35
USH1C-207ENST00000527720 USF3Q68DE3 2245 aa12.85□□□□□ -0.35
USH1C-207ENST00000527720 MED19A0JLT2 244 aaPredicted RBP12.85□□□□□ -0.35
USH1C-207ENST00000527720 COLCA2A8K830 154 aa12.85□□□□□ -0.35
USH1C-207ENST00000527720 SRRM5B3KS81 715 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms