RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 HEBP1Q9NRV9 189 aa3.48□□□□□ -1.85
CD44-213ENST00000525209 LYRM2Q9NU23 88 aaPredicted RBP3.48□□□□□ -1.85
CD44-213ENST00000525209 SPANXCQ9NY87 97 aa3.48□□□□□ -1.85
CD44-213ENST00000525209 COA4Q9NYJ1 87 aa3.48□□□□□ -1.85
CD44-213ENST00000525209 ZNF629Q9UEG4 869 aaPredicted RBP3.48□□□□□ -1.85
CD44-213ENST00000525209 RSL24D1Q9UHA3 163 aaKnown RBP3.48□□□□□ -1.85
CD44-213ENST00000525209 SIGLEC7Q9Y286 467 aa3.48□□□□□ -1.85
CD44-213ENST00000525209 UGT2A1Q9Y4X1 527 aa3.48□□□□□ -1.85
CD44-213ENST00000525209 A0A087WX48 190 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 C9orf170A2RU37 121 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 FAM25AB3EWG3 89 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 FAM25CB3EWG5 89 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 FAM25GB3EWG6 89 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 G3V2T6 193 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 UPK2O00526 184 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 TPST1O60507 370 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 GADD45GO95257 159 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 CA2P00918 260 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 FSHBP01225 129 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 OR8U8P0C7N1 319 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 CDK2P24941 298 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 FMO3P31513 532 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 PHBP35232 272 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 CD200P41217 278 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 PSMB2P49721 201 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 SLC25A1P53007 311 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 RPS24P62847 133 aaKnown RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 ELF3P78545 371 aaPredicted RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 SLC10A1Q14973 349 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 ZNF146Q15072 292 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 TMEM236Q5W0B7 351 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 ZFAND6Q6FIF0 208 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 SLC35E4Q6ICL7 350 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 CXCL17Q6UXB2 119 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 CLEC19AQ6UXS0 136 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 Q6ZPA2 131 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 Q6ZRP5 223 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 YTHDF3Q7Z739 585 aaKnown RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 FAM24BQ8N5W8 94 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 DEFB125Q8N687 156 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 OR11H6Q8NGC7 330 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 OR11H7Q8NGC8 314 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 APOBEC3DQ96AK3 386 aaPredicted RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 ZNF501Q96CX3 271 aaPredicted RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 SLC35G5Q96KT7 338 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 CAPZA3Q96KX2 299 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 PRSS27Q9BQR3 290 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 HSPB9Q9BQS6 159 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 C19orf24Q9BVV8 132 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 SLC25A31Q9H0C2 315 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 RNASE7Q9H1E1 156 aaKnown RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 HES4Q9HCC6 221 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 RBFOX1Q9NWB1 397 aaKnown RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 MED29Q9NX70 200 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 HDGFL3Q9Y3E1 203 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 TNRC18O15417 2968 aaPredicted RBP3.47□□□□□ -1.85
CD44-213ENST00000525209 NUP98P52948 1817 aa3.47□□□□□ -1.85
CD44-213ENST00000525209 KDM6AO15550 1401 aaPredicted RBP3.46□□□□□ -1.86
CD44-213ENST00000525209 PAPPA2Q9BXP8 1791 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 ARFGEF2Q9Y6D5 1785 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 CHD5Q8TDI0 1954 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 TRAV9-2A0A087WT02 112 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 PLAC8L1A1L4L8 177 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 TRAPPC13A5PLN9 417 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 PGPA6NDG6 321 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 CCDC160A6NGH7 325 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 C16orf97H3BN30 126 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 DEGS1O15121 323 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 PSPHP1O15172 72 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 CHST10O43529 356 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 DHRS3O75911 302 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 CDRT1O95170 752 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 NTN1O95631 604 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 TRBV12-3P01733 135 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 IGHMP01871 453 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 HBZP02008 142 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 CSF3P09919 207 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 LAMP1P11279 417 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 SPI1P17947 270 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 TALDO1P37837 337 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 RPL34P49207 117 aaKnown RBP3.46□□□□□ -1.86
CD44-213ENST00000525209 CCL23P55773 120 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 NDUFV3P56181 108 aaKnown RBP3.46□□□□□ -1.86
CD44-213ENST00000525209 DAD1P61803 113 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 GNG5P63218 68 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 CYCSP99999 105 aaKnown RBP3.46□□□□□ -1.86
CD44-213ENST00000525209 PNOCQ13519 176 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 PAFAH1B3Q15102 231 aaKnown RBP3.46□□□□□ -1.86
CD44-213ENST00000525209 TGIF1Q15583 401 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 Q499Y3 187 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 SLC25A30Q5SVS4 291 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 LCN12Q6JVE5 192 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 ZNF788Q6ZQV5 615 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 TMEM179BQ7Z7N9 219 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 STPG4Q8N801 248 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 OR2T4Q8NH00 348 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 OR4S2Q8NH73 311 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 OR10G6Q8NH81 332 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms