RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 DYNLT3P51808 116 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 RPL15P61313 204 aaKnown RBP14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 MRPS10P82664 201 aaKnown RBP14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 PRB3Q04118 309 aaPredicted RBP14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 LRRC75BQ2VPJ9 315 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 CNIH2Q6PI25 160 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 LIAT1Q6ZQX7 453 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 SLIRPQ9GZT3 109 aaKnown RBP14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 C6orf62Q9GZU0 229 aaPredicted RBP14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 RAB18Q9NP72 206 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 IFT46Q9NQC8 304 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 BATF3Q9NR55 127 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 SLC23A1Q9UHI7 598 aa14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 MRPS7Q9Y2R9 242 aaKnown RBP14.24□□□□□ -0.13
PACSIN3-202ENST00000524509 GAPDHP04406 335 aaKnown RBP14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 SCTP09683 121 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 CEACAM6P40199 344 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 IER3P46695 156 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 GNG10P50151 68 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 SSX2Q16385 188 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 HOGA1Q86XE5 327 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 NUDCD2Q8WVJ2 157 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 GCDHQ92947 438 aaPredicted RBP14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 ZNF48Q96MX3 618 aaPredicted RBP14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 GINS4Q9BRT9 223 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 CABLES2Q9BTV7 478 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 ABHD14AQ9BUJ0 271 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 NXF2Q9GZY0 626 aaKnown RBP14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 PIPOXQ9P0Z9 390 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 EXTL2Q9UBQ6 330 aa14.23□□□□□ -0.13
PACSIN3-202ENST00000524509 IGHV3-43A0A0B4J1X8 118 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 DPPA5A6NC42 116 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 FAM172BPA6NC97 362 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 IGHV3-43DP0DP04 118 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 ARPC4P59998 168 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 TPTE2P1Q5T6R2 138 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 LHFPL4Q7Z7J7 247 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 IZUMO1Q8IYV9 350 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 BEST4Q8NFU0 473 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 OR52L2PQ8NGH6 319 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 OR10V1Q8NGI7 309 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 UBALD1Q8TB05 177 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 TOMM40LQ969M1 308 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 DIRAS2Q96HU8 199 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 SSX3Q99909 188 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 TOLLIPQ9H0E2 274 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 ZNF230Q9UIE0 474 aaPredicted RBP14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 ANXA10Q9UJ72 324 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 HILPDAQ9Y5L2 63 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 DSCAML1Q8TD84 2053 aa14.22□□□□□ -0.13
PACSIN3-202ENST00000524509 TRBV6-7A0A0A0MS04 114 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 RAB29O14966 203 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 HOXA3O43365 443 aaPredicted RBP14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 RNASE1P07998 156 aaKnown RBP14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 PPP1CCP36873 323 aaKnown RBP14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 ZNF137PP52743 207 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 FAM71F2Q6NXP2 309 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 ZNF439Q8NDP4 499 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 LEAP2Q969E1 77 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 S1PR3Q99500 378 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 DCUN1D5Q9BTE7 237 aa14.21□□□□□ -0.13
PACSIN3-202ENST00000524509 DNAJC9-AS1A6NH13 148 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 LY6LH3BQJ8 138 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 CTDSP2O14595 271 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 BET1O15155 118 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 SSX5O60225 188 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 SLC22A5O76082 557 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 HLA-DQB1P01920 261 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 CRYBA1P05813 215 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 GSTT2P0CG29 244 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 GSTT2BP0CG30 244 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 TAS2R46P59540 309 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 ACTBP60709 375 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 UBA52P62987 128 aaKnown RBP14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 ZNF816Q0VGE8 651 aaPredicted RBP14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 SLC9A3R2Q15599 337 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 CT45A1Q5HYN5 189 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 PRR31Q5SQ13 230 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 PYHIN1Q6K0P9 492 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 C16orf87Q6PH81 154 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 CT45A3Q8NHU0 189 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 AKR1E2Q96JD6 320 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 NECAP2Q9NVZ3 263 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 ZNF221Q9UK13 617 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 VPREB3Q9UKI3 123 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 ELF5Q9UKW6 265 aaPredicted RBP14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 KIAA2026Q5HYC2 2103 aa14.2□□□□□ -0.14
PACSIN3-202ENST00000524509 LANCL1O43813 399 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 IGHV3-7P01780 117 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 FAM106CPP0CH98 169 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 OR3A3P47888 321 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 SSBP1Q04837 148 aaKnown RBP14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 PDLIM3Q53GG5 364 aaPredicted RBP14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 Q6ZPA2 131 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 THNSL2Q86YJ6 484 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 SNX29P2Q8IUI4 249 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 LAX1Q8IWV1 398 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 LYG1Q8N1E2 194 aa14.19□□□□□ -0.14
PACSIN3-202ENST00000524509 ZDHHC22Q8N966 263 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms