RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 IGHV3-43A0A0B4J1X8 118 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 CLPSL1A2RUU4 121 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 ITGB1BP1O14713 200 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 DIRAS3O95661 229 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 GAPDHP04406 335 aaKnown RBP10.1□□□□□ -0.79
VEGFA-225ENST00000523950 GSTP1P09211 210 aaKnown RBP10.1□□□□□ -0.79
VEGFA-225ENST00000523950 IGHV3-43DP0DP04 118 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 SOX6P35712 828 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 KIR2DS4P43632 304 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 PPP5CP53041 499 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 LSM3P62310 102 aaKnown RBP10.1□□□□□ -0.79
VEGFA-225ENST00000523950 PITPNAQ00169 270 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 RELBQ01201 579 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 KIR2DS1Q14954 304 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 SRSF7Q16629 238 aaKnown RBP eCLIP10.1□□□□□ -0.797e-11■□□□□ 9.1
VEGFA-225ENST00000523950 TRIM16LQ309B1 348 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 C11orf88Q6PI97 169 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 THNSL2Q86YJ6 484 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 CENPSQ8N2Z9 138 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 C3orf56Q8N813 242 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 PHF21AQ96BD5 680 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 KCTD12Q96CX2 325 aaKnown RBP10.1□□□□□ -0.79
VEGFA-225ENST00000523950 CYYR1Q96J86 154 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 AKR1E2Q96JD6 320 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 NPFFR1Q9GZQ6 430 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 NXF2Q9GZY0 626 aaKnown RBP10.1□□□□□ -0.79
VEGFA-225ENST00000523950 KCNK7Q9Y2U2 307 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
VEGFA-225ENST00000523950 A0A1W2PPI3 338 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 HSD17B6O14756 317 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 IGHV3-7P01780 117 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 HNRNPCP07910 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
VEGFA-225ENST00000523950 FCGR3AP08637 254 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 FAM106CPP0CH98 169 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 GNB3P16520 340 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 DTYMKP23919 212 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 S100A5P33763 92 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 TALDO1P37837 337 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 RPS19P39019 145 aaKnown RBP10.09□□□□□ -0.79
VEGFA-225ENST00000523950 ARFRP1Q13795 201 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 HABP2Q14520 560 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-225ENST00000523950 OXA1LQ15070 435 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 PNLIPRP3Q17RR3 467 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 OLFML2AQ68BL7 652 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 Q6ZPA2 131 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 Q6ZS49 121 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 Q6ZSV7 163 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 OR10V1Q8NGI7 309 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 OR4C13Q8NGP0 309 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 MCFD2Q8NI22 146 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 ST6GALNAC6Q969X2 333 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 HDHD3Q9BSH5 251 aaPredicted RBP10.09□□□□□ -0.79
VEGFA-225ENST00000523950 ABHD14AQ9BUJ0 271 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 ZNF747Q9BV97 191 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 SLIRPQ9GZT3 109 aaKnown RBP10.09□□□□□ -0.79
VEGFA-225ENST00000523950 DCSTAMPQ9H295 470 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 GHITMQ9H3K2 345 aa10.09□□□□□ -0.79
VEGFA-225ENST00000523950 A0A1W2PPE3 182 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 FAM90A9PA6NNJ1 464 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 TRDCB7Z8K6 153 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 CHST1O43916 411 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 MDKP21741 143 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-225ENST00000523950 ZBTB25P24278 435 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 TGFBR1P36897 503 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 ETV6P41212 452 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 RAB13P51153 203 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 BCAP31P51572 246 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 NCS1P62166 190 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 CT45A1Q5HYN5 189 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 HACD4Q5VWC8 232 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 FAM71F2Q6NXP2 309 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 CCBE1Q6UXH8 406 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-225ENST00000523950 OR2AK2Q8NG84 335 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 OR52L2PQ8NGH6 319 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 OR4A4PQ8NGN8 299 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 CT45A3Q8NHU0 189 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 LINC01006Q8NI28 216 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 CAPSLQ8WWF8 208 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 IL1F10Q8WWZ1 152 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 EDARADDQ8WWZ3 215 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 DIABLOQ9NR28 239 aa10.08□□□□□ -0.8
VEGFA-225ENST00000523950 A0A075B6Q4 140 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 IGHV1-3A0A0C4DH29 117 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 M0QZK8 103 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 TIMM23O14925 209 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 SLC31A2O15432 143 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 LANCL1O43813 399 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 OR2F2O95006 317 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 PPP1CCP36873 323 aaKnown RBP10.07□□□□□ -0.8
VEGFA-225ENST00000523950 ZNF134P52741 427 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 VBP1P61758 197 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 GNMTQ14749 295 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 ZNF260Q3ZCT1 412 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 CDNFQ49AH0 187 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 UBE2NLQ5JXB2 153 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 TGIF2LXQ8IUE1 241 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 IZUMO1Q8IYV9 350 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 LYG1Q8N1E2 194 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms