RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 PSMF1Q92530 271 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 ZFYVE21Q9BQ24 234 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 PARLQ9H300 379 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 FAM166BA8MTA8 275 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 CRXO43186 299 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-213ENST00000523488 EN2P19622 333 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-213ENST00000523488 CDKN1AP38936 164 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 P2RY2P41231 377 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 GABRA2P47869 451 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 ELAVL3Q14576 367 aaKnown RBP7.17□□□□□ -1.26
CSMD1-213ENST00000523488 KISS1Q15726 138 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 MUC15Q8N387 334 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 SMIM12Q96EX1 92 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 ZBP1Q9H171 429 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF430Q9H8G1 570 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-213ENST00000523488 IGLV3-32A0A0A0MS00 114 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 PIGBOS1A0A0B4J2F0 54 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 C3orf85A0A1B0GTC6 90 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 IGLC7A0M8Q6 106 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 H3BMH7 237 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 TOX4O94842 621 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 CLDN18P56856 261 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 TMEM267Q0VDI3 215 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF542PQ5EBM4 170 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 ERASQ7Z444 233 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 SHISA5Q8N114 240 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 BATF2Q8N1L9 274 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 C16orf52Q8NHV5 167 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 LYZL4Q96KX0 146 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 VDAC3Q9Y277 283 aa7.17□□□□□ -1.26
CSMD1-213ENST00000523488 IGKV3D-11A0A0A0MRZ8 115 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 MDFIC2A0A1B0GVS7 189 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SCGB1A1P11684 91 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PVRP15151 417 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 ANOS1P23352 680 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 AMTP48728 403 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF525Q8N782 197 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 BCL2L2Q92843 193 aaPredicted RBP7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PIGTQ969N2 578 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PINX1Q96BK5 328 aaKnown RBP7.16□□□□□ -1.26
CSMD1-213ENST00000523488 LOXL4Q96JB6 756 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 KLHDC3Q9BQ90 382 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 OR10A5Q9H207 317 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF160Q9HCG1 818 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 FGF22Q9HCT0 170 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 IGHV1-69-2A0A0G2JMI3 117 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SERF1AO75920 110 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 CTSBP07858 339 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 CTXN2P0C2S0 81 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 ADH5P11766 374 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PGCP20142 388 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 OR1D4P47884 311 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SHBQ15464 509 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 OCIAD2Q56VL3 154 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 OR10J3Q5JRS4 329 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 Q5PR19 223 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 DOK3Q7L591 496 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 HAPLN4Q86UW8 402 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 OOSP2Q86WS3 158 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PRR22Q8IZ63 422 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SGMS2Q8NHU3 365 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PRTFDC1Q9NRG1 225 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 LHFPL6Q9Y693 200 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PCSK5Q92824 1860 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 ALG1L2C9J202 215 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 CACNA1GO43497 2377 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 TRAF3IP2O43734 574 aaPredicted RBP7.16□□□□□ -1.26
CSMD1-213ENST00000523488 HLA-DRB1P01911 266 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 PMCHP20382 165 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 KITLGP21583 273 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SRD5A2P31213 254 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 RHOBP62745 196 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF90Q03938 601 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 OR4A47Q6IF82 309 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SLC25A47Q6Q0C1 308 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 C11orf40Q8WZ69 217 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SFXN3Q9BWM7 321 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 CST9LQ9H4G1 147 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 MBNL1Q9NR56 388 aaKnown RBP7.16□□□□□ -1.26
CSMD1-213ENST00000523488 ARL2-SNX15V9GYD0 113 aa7.16□□□□□ -1.26
CSMD1-213ENST00000523488 SHISA7A6NL88 538 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 PMS2P5A8MQ11 134 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 MPPED1O15442 326 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 UTS2O95399 124 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 FAHP16930 419 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 IL12BP29460 328 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 GUCA1AP43080 201 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-213ENST00000523488 POU3F1Q03052 451 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-213ENST00000523488 FFAR4Q5NUL3 377 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 HLA-DQA1Q5Y7H0 255 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 TCF23Q7RTU1 214 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 C1QL2Q7Z5L3 287 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 FAM58AQ8N1B3 248 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 LSM10Q969L4 123 aaKnown RBP7.15□□□□□ -1.26
CSMD1-213ENST00000523488 BORCS7Q96B45 105 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 TXNDC17Q9BRA2 123 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 VSIRQ9H7M9 311 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 SHANK1Q9Y566 2161 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 NCKAP5O14513 1909 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 CTSEP14091 401 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms