RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IGLL5B9A064 214 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 RBMXL2O75526 392 aaKnown RBP10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 HBZP02008 142 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 ALKBH1Q13686 389 aaKnown RBP10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 MORN2Q502X0 79 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 ZNF691Q5VV52 312 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 KCTD20Q7Z5Y7 419 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 OR10K1Q8NGX5 313 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 GRPEL2Q8TAA5 225 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 ABHD14AQ9BUJ0 271 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 TEX12Q9BXU0 123 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 TINAGL1Q9GZM7 467 aaPredicted RBP10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 RCC2Q9P258 522 aaKnown RBP10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 SELENOKQ9Y6D0 94 aa10.25□□□□□ -0.77
NKX3-1-202ENST00000523261 AIPO00170 330 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 PRKYO43930 277 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 SULT1C4O75897 302 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 OR7C1O76099 320 aaPredicted RBP10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 FADS2O95864 444 aaKnown RBP10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 ISG15P05161 165 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 ADARB1P78563 741 aaKnown RBP10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 GNMTQ14749 295 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 TM4SF20Q53R12 229 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 TMEM177Q53S58 311 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 CYP2R1Q6VVX0 501 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 PRR18Q8N4B5 295 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 OR51A4Q8NGJ6 313 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 USMG5Q96IX5 58 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 RAB9BQ9NP90 201 aa10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 METTL1Q9UBP6 276 aaKnown RBP10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 APOBP04114 4563 aaKnown RBP10.24□□□□□ -0.77
NKX3-1-202ENST00000523261 SAA2-SAA4A0A096LPE2 208 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 KIR2DL5BA0A0G2JN68 375 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 KIR2DL5BA0A0G2JPC4 375 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 A0A1W2PQL4 384 aaPredicted RBP10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 SAA2P0DJI9 122 aaPredicted RBP10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 ATP6V1B2P21281 511 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 SSBP2P81877 361 aaPredicted RBP10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 GK3PQ14409 553 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 FXYD3Q14802 87 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 SYT6Q5T7P8 510 aaPredicted RBP10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 KIR2DL5AQ8N109 375 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 OR2G2Q8NGZ5 317 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 GHSRQ92847 366 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 MAGIXQ9H6Y5 334 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 OR2S2Q9NQN1 319 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 ST3GAL6Q9Y274 331 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 LRP1BQ9NZR2 4599 aa10.23□□□□□ -0.77
NKX3-1-202ENST00000523261 M0R2N4 97 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 SLC22A1O15245 554 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 GSTP1P09211 210 aaKnown RBP10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 MFAP2P55001 183 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 RBM11P57052 281 aaKnown RBP10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 PSG5Q15238 335 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 RSU1Q15404 277 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 ANKRD55Q3KP44 614 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 NHLRC3Q5JS37 347 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 C6orf183Q5T699 404 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 AADACL4Q5VUY2 407 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 STPG3Q8N7X2 389 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 OR13C3Q8NGS6 347 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 NEK7Q8TDX7 302 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 FBLIM1Q8WUP2 373 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 CACNG8Q8WXS5 425 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 MRPS24Q96EL2 167 aaKnown RBP10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 SCRT2Q9NQ03 307 aa10.22□□□□□ -0.77
NKX3-1-202ENST00000523261 TCRBV5S2A0A599 114 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 OR5H14A6NHG9 310 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 M0R129 80 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 GABRPO00591 440 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 GEMIN2O14893 280 aaKnown RBP10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 RBBP9O75884 186 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 HTR3BO95264 441 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 CT45A6P0DMU7 189 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 CT45A5P0DMU8 189 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 CT45A7P0DMV0 189 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 PPP1CCP36873 323 aaKnown RBP10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 NXNL2Q5VZ03 156 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 LPCAT4Q643R3 524 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 ZNF57Q68EA5 555 aaPredicted RBP10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 ASCL4Q6XD76 172 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 GLDNQ6ZMI3 551 aaPredicted RBP10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 OR52L2PQ8NGH6 319 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 TNFAIP8L1Q8WVP5 186 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 FRRS1LQ9P0K9 344 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 TRAPPC2LQ9UL33 140 aa10.21□□□□□ -0.77
NKX3-1-202ENST00000523261 H0YJW9 148 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 SULT1B1O43704 296 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 SNX3O60493 162 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 CCDC22O60826 627 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 SCAF4O95104 1147 aaKnown RBP10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 OR2T7P0C7T2 308 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 RCC1P18754 421 aaPredicted RBP10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 CBLN1P23435 193 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 FCGR2BP31994 310 aaPredicted RBP10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 NANOS3P60323 173 aaKnown RBP10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 TP53I3Q53FA7 332 aa10.2□□□□□ -0.78
NKX3-1-202ENST00000523261 ATAD3CQ5T2N8 411 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms