RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 RDH8Q9NYR8 311 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 ZNRD1Q9P1U0 126 aa13.25□□□□□ -0.29
LSM1-204ENST00000522515 J3QR06 171 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 SLC31A2O15432 143 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 RGS11O94810 467 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 RAB3DO95716 219 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 TBPP20226 339 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 UBE2E1P51965 193 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 ACTBL2Q562R1 376 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 CT45A1Q5HYN5 189 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 VAX1Q5SQQ9 334 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 FAM120AOSQ5T036 256 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 ZNF57Q68EA5 555 aaPredicted RBP13.24□□□□□ -0.29
LSM1-204ENST00000522515 OR9G1Q8NH87 305 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 CT45A3Q8NHU0 189 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 ZNF69Q9UC07 566 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 FSHBP01225 129 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 IGLV1-47P01700 117 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 AKAIN1P0CW23 69 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 FCGR2CP31995 323 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 INPP1P49441 399 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 Q3ZCU0 254 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 LY6G6FQ5SQ64 297 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 GPR157Q5UAW9 335 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 ZNF626Q68DY1 528 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
LSM1-204ENST00000522515 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 Q71RC1 249 aaPredicted RBP13.24□□□□□ -0.29
LSM1-204ENST00000522515 OR4C16Q8NGL9 310 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 C11orf54Q9H0W9 315 aaPredicted RBP13.24□□□□□ -0.29
LSM1-204ENST00000522515 ABCB10Q9NRK6 738 aa13.24□□□□□ -0.29
LSM1-204ENST00000522515 IGHV1-69DA0A0B4J2H0 117 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 LINC00854A0A1B0GVQ3 168 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 ODF3BA8MYP8 253 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 TOR1AO14656 332 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 TUSC2O75896 110 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 IGHV1-69P01742 117 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 ARG1P05089 322 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 AP3S2P59780 193 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 ZNF660Q6AZW8 331 aaPredicted RBP13.23□□□□□ -0.29
LSM1-204ENST00000522515 DHRS11Q6UWP2 260 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 BRD3OSQ6XYD6 125 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 C8orf31Q8N9H6 132 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 BEND2Q8NDZ0 799 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 OR56B4Q8NH76 319 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 ZNF596Q8TC21 504 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 GIMAP1Q8WWP7 306 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 SLC6A7Q99884 636 aa13.23□□□□□ -0.29
LSM1-204ENST00000522515 ST8SIA5O15466 376 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 UPK1BO75841 260 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 AMY2AP04746 511 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 IFNA6P05013 189 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 ZNF735P0CB33 412 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 AADACP22760 399 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 PRRX1P54821 245 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 TSPAN5P62079 268 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 IFITM3Q01628 133 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 HLA-DRB5Q30154 266 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 LDLRAD2Q5SZI1 272 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 RUSC1-AS1Q66K80 236 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 LINC00311Q8N616 119 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 OR4P4Q8NGL7 312 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 OR6F1Q8NGZ6 308 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 NANPQ8TBE9 248 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 EDARADDQ8WWZ3 215 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 AGMATQ9BSE5 352 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 ZNF2Q9BSG1 426 aaPredicted RBP13.22□□□□□ -0.29
LSM1-204ENST00000522515 ABHD14AQ9BUJ0 271 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 MMP28Q9H239 520 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 HRASLSQ9HDD0 168 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 OR2W1Q9Y3N9 320 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 F8P00451 2351 aa13.22□□□□□ -0.29
LSM1-204ENST00000522515 IGKV1D-13A0A0B4J2D9 117 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 ITGB1BP1O14713 200 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 NPFFO15130 113 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 OR8U9P0C7N5 309 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 IGKV1-13P0DP09 117 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 MEF2DQ14814 521 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 LHFPL4Q7Z7J7 247 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 ARRDC1Q8N5I2 433 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 ABHD14BQ96IU4 210 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 IFI27L2Q9H2X8 130 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 TMEM160Q9NX00 188 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 RNF150Q9ULK6 438 aa13.21□□□□□ -0.29
LSM1-204ENST00000522515 PPYP01298 95 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 SAA4P35542 130 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 FXYD4P59646 89 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 OR10X1Q8NGY0 326 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 NUP50Q9UKX7 468 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 SOX21Q9Y651 276 aaPredicted RBP13.2□□□□□ -0.3
LSM1-204ENST00000522515 BUB1B-PAK6H3BSN5 160 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 PLA2G10O15496 165 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 RAB7AP51149 207 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 LGALS4P56470 323 aa13.2□□□□□ -0.3
LSM1-204ENST00000522515 MIDNQ504T8 468 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms