RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 PAK1IP1Q9NWT1 392 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 PEX16Q9Y5Y5 336 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 FCN1O00602 326 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 SC5DO75845 299 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 LGALS1P09382 135 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 RIPK1Q13546 671 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 RCN1Q15293 331 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 SMN1Q16637 294 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 ECSCRQ19T08 205 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 TMEM30BQ3MIR4 351 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 ZNF833PQ6ZTB9 187 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 MUL1Q969V5 352 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 ZNF251Q9BRH9 671 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 ABHD14AQ9BUJ0 271 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 BANF2Q9H503 90 aa11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 MBNL3Q9NUK0 354 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-213ENST00000522504 TRBV5-5A0A0J9YX44 114 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 A0A1W2PN81 502 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 UBE2QL1A1L167 161 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 OGG1O15527 345 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 NDUFA3O95167 84 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 BAG2O95816 211 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 IGHV3-11P01762 117 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 IGHV4-30-4P0DP06 118 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 CHRNA7P36544 502 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 RPS11P62280 158 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 LRRC36Q1X8D7 754 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 CCDC58Q4VC31 144 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 GLIPR1L1Q6UWM5 242 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 MRPL30Q8TCC3 161 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 Q96MT0 163 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 SLC29A1Q99808 456 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 SPACA1Q9HBV2 294 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 FGF20Q9NP95 211 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 MRPS28Q9Y2Q9 187 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 A3GALT2U3KPV4 340 aa11.74□□□□□ -0.53
TRAPPC9-213ENST00000522504 SAA2-SAA4A0A096LPE2 208 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 A0A1W2PPK0 400 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 WBP4O75554 376 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 GPX5O75715 221 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 SAA2P0DJI9 122 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 CRIP2P52943 208 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 CX3CL1P78423 397 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 LYPD6Q86Y78 171 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 GHSRQ92847 366 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 SMIM19Q96E16 107 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 SELENOIQ9C0D9 397 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 FBXL15Q9H469 300 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 RAB9BQ9NP90 201 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 C19orf73Q9NVV2 129 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 CLEC2DQ9UHP7 191 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 GAB2Q9UQC2 676 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 FOXA2Q9Y261 457 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 RPL36Q9Y3U8 105 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 NUBP2Q9Y5Y2 271 aa11.73□□□□□ -0.53
TRAPPC9-213ENST00000522504 LOC100130705A0A1B0GUX0 176 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 LDLRAD4O15165 306 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 OR8U9P0C7N5 309 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 GPR176Q14439 515 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 TRAT1Q6PIZ9 186 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 FAM131AQ6UXB0 335 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 PQLC1Q8N2U9 271 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 JAGN1Q8N5M9 183 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 MRPS24Q96EL2 167 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 Q96M66 194 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 RDH12Q96NR8 316 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 MS4A10Q96PG2 267 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 FAM103A1Q9BTL3 118 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 IFI27L2Q9H2X8 130 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 BABAM2Q9NXR7 383 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 JPT1Q9UK76 154 aa11.72□□□□□ -0.53
TRAPPC9-213ENST00000522504 TRBV5-7A0A0A0MS05 114 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 YPEL1O60688 119 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 MAS1P04201 325 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 MGMTP16455 207 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 FUT3P21217 361 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 HTD2P86397 168 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 C6orf141Q5SZD1 244 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 ZNF660Q6AZW8 331 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 DMKNQ6E0U4 476 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 PGLYRP3Q96LB9 341 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 YPEL2Q96QA6 119 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 PARP12Q9H0J9 701 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 CST11Q9H112 138 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 GHITMQ9H3K2 345 aa11.71□□□□□ -0.53
TRAPPC9-213ENST00000522504 RRHO14718 337 aa11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 ST8SIA5O15466 376 aa11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 CA11O75493 328 aa11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 ATP6V1G2O95670 118 aa11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 IGLV1-51P01701 117 aa11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 HSPB1P04792 205 aaKnown RBP11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 CT45A6P0DMU7 189 aa11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 CT45A5P0DMU8 189 aa11.7□□□□□ -0.54
TRAPPC9-213ENST00000522504 CT45A7P0DMV0 189 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms