RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 CMTM3Q96MX0 182 aa8.19□□□□□ -1.1
TRIM35-204ENST00000521283 RBM14Q96PK6 669 aaKnown RBP8.19□□□□□ -1.1
TRIM35-204ENST00000521283 NKX3-1Q99801 234 aaPredicted RBP8.19□□□□□ -1.1
TRIM35-204ENST00000521283 CENPOQ9BU64 300 aa8.19□□□□□ -1.1
TRIM35-204ENST00000521283 TMEM59Q9BXS4 323 aa8.19□□□□□ -1.1
TRIM35-204ENST00000521283 GHITMQ9H3K2 345 aa8.19□□□□□ -1.1
TRIM35-204ENST00000521283 PSG11Q9UQ72 335 aa8.19□□□□□ -1.1
TRIM35-204ENST00000521283 SDCBPO00560 298 aaPredicted RBP8.18□□□□□ -1.1
TRIM35-204ENST00000521283 GAPDHP04406 335 aaKnown RBP8.18□□□□□ -1.1
TRIM35-204ENST00000521283 ARSBP15848 533 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 RAB13P51153 203 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 NCS1P62166 190 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 RPS27AP62979 156 aaKnown RBP8.18□□□□□ -1.1
TRIM35-204ENST00000521283 HTD2P86397 168 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 ZNF816Q0VGE8 651 aaPredicted RBP8.18□□□□□ -1.1
TRIM35-204ENST00000521283 LY6G6FQ5SQ64 297 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 LDLRAD2Q5SZI1 272 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 LRRTM1Q86UE6 522 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 C15orf40Q8WUR7 153 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 CFHR4Q92496 578 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 TM2D1Q9BX74 207 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 C6orf62Q9GZU0 229 aaPredicted RBP8.18□□□□□ -1.1
TRIM35-204ENST00000521283 MBNL3Q9NUK0 354 aaKnown RBP8.18□□□□□ -1.1
TRIM35-204ENST00000521283 GFOD1Q9NXC2 390 aa8.18□□□□□ -1.1
TRIM35-204ENST00000521283 TRAV1-2A0A0B4J238 106 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 LOC100506127A0A0U1RQW1 187 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 A0A1W2PP11 408 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 FAM90A9PA6NNJ1 464 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 C15orf65H3BRN8 121 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 SLC17A2O00624 439 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 FGF16O43320 207 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 CHST1O43916 411 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 MPIG6BO95866 241 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 SSTR5P35346 364 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 VDAC2P45880 294 aaPredicted RBP8.17□□□□□ -1.1
TRIM35-204ENST00000521283 PLA1AQ53H76 456 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 CCBE1Q6UXH8 406 aaPredicted RBP8.17□□□□□ -1.1
TRIM35-204ENST00000521283 BAIAP2L2Q6UXY1 529 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 MOB1BQ7L9L4 216 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 KLHDC1Q8N7A1 406 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 TMEM104Q8NE00 496 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 OR8H1Q8NGG4 311 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 RFESDQ8TAC1 157 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 DEDD2Q8WXF8 326 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 SGCDQ92629 289 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 GALMQ96C23 342 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 CHCHD6Q9BRQ6 235 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 SLC25A33Q9BSK2 321 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 BANF2Q9H503 90 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 ABRACLQ9P1F3 81 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 JPT1Q9UK76 154 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 HSF4Q9ULV5 492 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 U3KQE9 123 aa8.17□□□□□ -1.1
TRIM35-204ENST00000521283 A0A1B0GVG6 124 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 TMEM14DPA8MWL7 114 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 CSF1P09603 554 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 MYL9P24844 172 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 GDNFP39905 211 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 ZNF137PP52743 207 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 LOXL3P58215 753 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 HABP2Q14520 560 aaPredicted RBP8.16□□□□□ -1.1
TRIM35-204ENST00000521283 ARL6IP1Q15041 203 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 TMEM91Q6ZNR0 172 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 SLC25A48Q6ZT89 311 aaKnown RBP8.16□□□□□ -1.1
TRIM35-204ENST00000521283 TMEM219Q86XT9 240 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 LYSMD2Q8IV50 215 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 OR56B1Q8NGI3 324 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 CCDC107Q8WV48 283 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 TAF15Q92804 592 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRIM35-204ENST00000521283 TMEM203Q969S6 136 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 WNT10AQ9GZT5 417 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 WNK1Q9H4A3 2382 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 PLEKHJ1Q9NW61 149 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 GNG12Q9UBI6 72 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 MOB4Q9Y3A3 225 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 V9GY05 133 aa8.16□□□□□ -1.1
TRIM35-204ENST00000521283 TRBV6-6A0A0A6YYG2 114 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 C12orf77C9JDV5 145 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 HSD17B6O14756 317 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 YPEL1O60688 119 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 FBXO24O75426 580 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 HBZP02008 142 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 OPN1MWP04001 364 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 OPN1MW2P0DN77 364 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 OPN1MW3P0DN78 364 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 PAX6P26367 422 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 CHATP28329 748 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 CD1BP29016 333 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 BLVRBP30043 206 aaPredicted RBP8.15□□□□□ -1.1
TRIM35-204ENST00000521283 TALDO1P37837 337 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 SCAND1P57086 179 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 RAB25P57735 213 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 QRFPP83859 136 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 EBI3Q14213 229 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 INSL4Q14641 139 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 RAB11BQ15907 218 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 FAM27D1Q5T7N8 215 aa8.15□□□□□ -1.1
TRIM35-204ENST00000521283 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms