RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FCAMRQ8WWV6 532 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SLC25A44Q96H78 314 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 C7orf34Q96L11 122 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 PPP3R2Q96LZ3 170 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 GAFA1Q96PS6 74 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 CHRDL1Q9BU40 450 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 CCDC32Q9BV29 185 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 PAPOLGQ9BWT3 736 aaKnown RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 FGF23Q9GZV9 251 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 GABARAPL1Q9H0R8 117 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SLC25A19Q9HC21 320 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 INIPQ9NRY2 104 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 C19orf12Q9NSK7 152 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 ZFP57Q9NU63 452 aa2.84□□□□□ -1.95
VPS13B-208ENST00000521037 MRPL39Q9NYK5 338 aaKnown RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 CCDC59Q9P031 241 aaKnown RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 SAMD4AQ9UPU9 718 aaKnown RBP2.84□□□□□ -1.95
VPS13B-208ENST00000521037 TRAV36DV7A0A075B6V5 113 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 A0A096LPI6 279 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 A0A0A6YYD4 124 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 A0A1B0GWA3 101 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 OR6C6A6NF89 314 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 FAM220BPB1ANY3 271 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 FAM25AB3EWG3 89 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 FAM25CB3EWG5 89 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 FAM25GB3EWG6 89 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 I3L521 148 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 J3QRK9 145 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 WRBO00258 174 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 IMPA2O14732 288 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 SURF4O15260 269 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 SIGLEC5O15389 551 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 NDUFA2O43678 99 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 IDH3BO43837 385 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 TPST1O60507 370 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 UPK1BO75841 260 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 NXPH2O95156 264 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 KRT75O95678 551 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 CST1P01037 141 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 PTHP01270 115 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 IGHG1P01857 330 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 TSPAN19P0C672 248 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 GSTT2P0CG29 244 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 GSTT2BP0CG30 244 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 PPIBP23284 216 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 S100A5P33763 92 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 SRP9P49458 86 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 GDI2P50395 445 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 INSL3P51460 131 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 RPL27P61353 136 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 PUDPQ08623 228 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 CD47Q08722 323 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 C1DQ13901 141 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 KCNJ8Q15842 424 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 ABCA11PQ4W5N1 156 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 UBE2UQ5VVX9 321 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 OTPQ5XKR4 325 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 ATRAIDQ6UW56 229 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 ACP7Q6ZNF0 438 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 SLC35D2Q76EJ3 337 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 TCF23Q7RTU1 214 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 NFE4Q86UQ8 179 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 TMEM17Q86X19 198 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 MICU2Q8IYU8 434 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 OFCC1Q8IZS5 231 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 CLDN22Q8N7P3 220 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 FNDC5Q8NAU1 212 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 OR11H6Q8NGC7 330 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 OR5T2Q8NGG2 359 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 OR6F1Q8NGZ6 308 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 MCFD2Q8NI22 146 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 GRPEL2Q8TAA5 225 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 DYNC2LI1Q8TCX1 351 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 SECTM1Q8WVN6 248 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 HPSE2Q8WWQ2 592 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 LIPHQ8WWY8 451 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 SLC38A4Q969I6 547 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 TMEM106AQ96A25 262 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 YIPF6Q96EC8 236 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 PYURFQ96I23 114 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 ST6GAL2Q96JF0 529 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 C18orf15Q96N68 181 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 OVOL2Q9BRP0 275 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 NXF2Q9GZY0 626 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 EVA1AQ9H8M9 152 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 ISYNA1Q9NPH2 558 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 RPRD1BQ9NQG5 326 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 NANSQ9NR45 359 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 PLCXD1Q9NUJ7 323 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 DCAF13Q9NV06 445 aaKnown RBP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 MBD2Q9UBB5 411 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 GNG12Q9UBI6 72 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 GHRLQ9UBU3 117 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 GLS2Q9UI32 602 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 LINC00527Q9UJ94 153 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 ZNF222Q9UK12 451 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.83□□□□□ -1.96
VPS13B-208ENST00000521037 FIS1Q9Y3D6 152 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 PEX16Q9Y5Y5 336 aa2.83□□□□□ -1.96
VPS13B-208ENST00000521037 SAA2-SAA4A0A096LPE2 208 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms