RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 RPL3LQ92901 407 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 ST6GALNAC6Q969X2 333 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZBTB9Q96C00 473 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 GFI1Q99684 422 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TXN2Q99757 166 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CLEC7AQ9BXN2 247 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 LPAR5Q9H1C0 372 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 RERGLQ9H628 205 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 Q9N2K0 584 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 HIF1ANQ9NWT6 349 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 TAS2R8Q9NYW2 309 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 ZMAT5Q9UDW3 170 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 LINC00854A0A1B0GVQ3 168 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR5H14A6NHG9 310 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 NPFFO15130 113 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SPINT2O43291 252 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 XRCC3O43542 346 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 CREBL2O60519 120 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 TOX4O94842 621 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR2F2O95006 317 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SCAF4O95104 1147 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 CYB5R3P00387 301 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 LYL1P12980 280 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 CELP19835 753 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 BRS3P32247 399 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 IER3P46695 156 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 HCCSP53701 268 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 HLA-DRB3P79483 266 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 RUNX1Q01196 453 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 FABP5Q01469 135 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 MPPED2Q15777 294 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SMN1Q16637 294 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 LRRC75BQ2VPJ9 315 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 HLA-DRB5Q30154 266 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 AARDQ4LEZ3 155 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR2G6Q5TZ20 316 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SLC25A24Q6NUK1 477 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 LPCAT3Q6P1A2 487 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 ZNF66Q6ZN08 573 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 Q6ZTK2 550 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SLC25A26Q70HW3 274 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 GDPD3Q7L5L3 318 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TCF23Q7RTU1 214 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 HOGA1Q86XE5 327 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR52N4Q8NGI2 321 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR4D6Q8NGJ1 314 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR10R2Q8NGX6 335 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 FAM3DQ96BQ1 224 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 COQ2Q96H96 371 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 NEDD4LQ96PU5 975 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TMEM59Q9BXS4 323 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 GON7Q9BXV9 100 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 MRPL18Q9H0U6 180 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 SLC2A8Q9NY64 477 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 PIPOXQ9P0Z9 390 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 U3KQK5 164 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 FAT3Q8TDW7 4589 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TRBV6-7A0A0A0MS04 114 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 CENPVL3A0A0U1RRI6 287 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TRDCB7Z8K6 153 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 H3BS24 57 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SYNGR1O43759 233 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 FCN3O75636 299 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 NDUFA3O95167 84 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 MGMTP16455 207 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 PRKACAP17612 351 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 PTNP21246 168 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 EEF1B2P24534 225 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 RCVRNP35243 200 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 POU3F4P49335 361 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 MFAP4P55083 255 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 TIRAPP58753 221 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 UBE2MP61081 183 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 RPS25P62851 125 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 RPL31P62899 125 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 UBA52P62987 128 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 EIF4EBP1Q13541 118 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 ZNF260Q3ZCT1 412 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 KLF17Q5JT82 389 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 DHRS11Q6UWP2 260 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 KCTD8Q6ZWB6 473 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 HSD17B13Q7Z5P4 300 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 ANGPTL5Q86XS5 388 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SUMF2Q8NBJ7 301 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR4S1Q8NGB4 309 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OR13C9Q8NGT0 318 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 MRPL30Q8TCC3 161 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 PHF21AQ96BD5 680 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 OTULINQ96BN8 352 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 CTDSP1Q9GZU7 261 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 SLC5A7Q9GZV3 580 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 C11orf54Q9H0W9 315 aaPredicted RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 MMP28Q9H239 520 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 C12orf4Q9NQ89 552 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 KCNIP1Q9NZI2 227 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 DPM3Q9P2X0 92 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 FBXL17Q9UF56 701 aa2.29□□□□□ -2.04
MCF2-208ENST00000519895 RBMX2Q9Y388 322 aaKnown RBP2.29□□□□□ -2.04
MCF2-208ENST00000519895 TRAV8-7A0A075B6U6 113 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms