RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 NUP37Q8NFH4 326 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 OR13A1Q8NGR1 328 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 RAB40CQ96S21 281 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 TOLLIPQ9H0E2 274 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 TREM1Q9NP99 234 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 PARP11Q9NR21 331 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 ZMAT5Q9UDW3 170 aaKnown RBP7.06□□□□□ -1.28
HMGB4-203ENST00000519684 CACNG5Q9UF02 275 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 RNF150Q9ULK6 438 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 MSRB2Q9Y3D2 182 aa7.06□□□□□ -1.28
HMGB4-203ENST00000519684 HEATR1Q9H583 2144 aaKnown RBP7.05□□□□□ -1.28
HMGB4-203ENST00000519684 CHD3Q12873 2000 aaKnown RBP7.05□□□□□ -1.28
HMGB4-203ENST00000519684 IGKV1D-17A0A075B6S4 117 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 A0A0G2JRQ6 117 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 CHST1O43916 411 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 GFRA3O60609 400 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 OMGP23515 440 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 SSTR5P35346 364 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 PPP1CCP36873 323 aaKnown RBP7.05□□□□□ -1.28
HMGB4-203ENST00000519684 RAB5CP51148 216 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 F2RL1P55085 397 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 DEFA5Q01523 94 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 CLINT1Q14677 625 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 MST1LQ2TV78 715 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 STX12Q86Y82 276 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 GCSAMQ8N6F7 178 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 TMEM252Q8N6L7 170 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 HSD17B11Q8NBQ5 300 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 SNRNP40Q96DI7 357 aaKnown RBP7.05□□□□□ -1.28
HMGB4-203ENST00000519684 ESRP2Q9H6T0 727 aaKnown RBP7.05□□□□□ -1.28
HMGB4-203ENST00000519684 RAB9BQ9NP90 201 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 RNF7Q9UBF6 113 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF835Q9Y2P0 537 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 ODAMA1E959 279 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF737O75373 536 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 IGKV1-39P01597 117 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 PRH1P02810 166 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 IGKV1D-39P04432 117 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 SPP1P10451 314 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 IRF2P14316 349 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 GZMHP20718 246 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 CCKARP32238 428 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 CD80P33681 288 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 GATA4P43694 442 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 CAMLGP49069 296 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 ASCL1P50553 236 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 UCNP55089 124 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 HTD2P86397 168 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 TCTEX1D1Q8N7M0 179 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 TCTEX1D2Q8WW35 142 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 EDARADDQ8WWZ3 215 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 IL19Q9UHD0 177 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 STRAPQ9Y3F4 350 aaKnown RBP7.05□□□□□ -1.28
HMGB4-203ENST00000519684 FRYQ5TBA9 3013 aa7.05□□□□□ -1.28
HMGB4-203ENST00000519684 IGHV3-43A0A0B4J1X8 118 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 TMEM218A2RU14 115 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 IGKV1-5P01602 117 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 IGHV1-46P01743 117 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 IGHV3-43DP0DP04 118 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 DYNLT3P51808 116 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 EDDM3BP56851 147 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF585BQ52M93 769 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF66Q6ZN08 573 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 OR5C1Q8NGR4 320 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 RFESDQ8TAC1 157 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 LRRC46Q96FV0 321 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 COQ3Q9NZJ6 369 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 GNG12Q9UBI6 72 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 MMP24Q9Y5R2 645 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 VSTM5A8MXK1 200 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 C15orf65H3BRN8 121 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 ABCD4O14678 606 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 SYNGR2O43760 224 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 DFFBO76075 338 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 CST7O76096 145 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 CLDN1O95832 211 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 TSPAN15O95858 294 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 LHBP01229 141 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 FAM87AP0C7U9 286 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 DANCRP0C864 163 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 NHLH1Q02575 133 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 AKR1C1Q04828 323 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF616Q08AN1 781 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 LTC4SQ16873 150 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 IZUMO4Q1ZYL8 232 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 PRR30Q53SZ7 412 aaPredicted RBP7.04□□□□□ -1.28
HMGB4-203ENST00000519684 SPRNQ5BIV9 151 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 OR2B11Q5JQS5 317 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 C16orf54Q6UWD8 224 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 BTNL8Q6UX41 500 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 SPAG16Q8N0X2 631 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 ZNF561Q8N587 486 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 FAM216AQ8WUB2 273 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 RND1Q92730 232 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 DIRC2Q96SL1 478 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 TSNAXQ99598 290 aaKnown RBP7.04□□□□□ -1.28
HMGB4-203ENST00000519684 HSD17B10Q99714 261 aaKnown RBP7.04□□□□□ -1.28
HMGB4-203ENST00000519684 MS4A7Q9GZW8 240 aaPredicted RBP7.04□□□□□ -1.28
HMGB4-203ENST00000519684 SH3BGRL3Q9H299 93 aa7.04□□□□□ -1.28
HMGB4-203ENST00000519684 OR6C3Q9NZP0 311 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms