RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 MCRIP1C9JLW8 97 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 SDCBPO00560 298 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 GEMIN2O14893 280 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 RRP8O43159 456 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 DFFBO76075 338 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 SLC22A5O76082 557 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 CFDP00746 253 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 CST4P01036 141 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 NGFP01138 241 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 CD8AP01732 235 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 HLA-AP01891 365 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 SERPINA5P05154 406 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 FCGR3AP08637 254 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 RPS2P15880 293 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 IGHV1-2P23083 117 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 ARR3P36575 388 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 RBP2P50120 134 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 NOVA1P51513 510 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 ATP1B3P54709 279 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 RBM11P57052 281 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 LINC00205P59089 165 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 TAS2R46P59540 309 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 HERV-K104P61576 105 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 PDZK1IP1Q13113 114 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 PRDX4Q13162 271 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 ARFRP1Q13795 201 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 RSU1Q15404 277 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 GRK1Q15835 563 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 FAM189A2Q15884 450 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 IGFBP7Q16270 282 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 TAF9Q16594 264 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 ACSF3Q4G176 576 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 PDLIM3Q53GG5 364 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 AADACL3Q5VUY0 350 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 FBXW9Q5XUX1 488 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 FAHD2BQ6P2I3 314 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 DHRS11Q6UWP2 260 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 MRPL21Q7Z2W9 205 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 CALHM1Q8IU99 346 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 GCNT2Q8N0V5 402 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 ARRDC1Q8N5I2 433 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 C9orf106Q8NAJ2 232 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 OR10AD1Q8NGE0 317 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 OR5H2Q8NGV7 314 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 MITD1Q8WV92 249 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 ASB13Q8WXK3 278 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 PIGCQ92535 297 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 APOBEC3DQ96AK3 386 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 CPNE2Q96FN4 548 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 FAHD2AQ96GK7 314 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 GMPPAQ96IJ6 420 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 TECTBQ96PL2 329 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 DUX5Q96PT3 197 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 TAAR6Q96RI8 345 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 PAPOLGQ9BWT3 736 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 PPA2Q9H2U2 334 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 LIME1Q9H400 295 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 EHFQ9NZC4 300 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 RNF7Q9UBF6 113 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 ZNF629Q9UEG4 869 aaPredicted RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 SLC7A11Q9UPY5 501 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 STARD10Q9Y365 291 aa3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 NOP16Q9Y3C1 178 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 URB1O60287 2271 aaKnown RBP3.98□□□□□ -1.77
CTNNA1-212ENST00000518919 PTPRBP23467 1997 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 TNRC6AQ8NDV7 1962 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 RNF222A6NCQ9 220 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 RFPL4AA6NLU0 287 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 CD300LBA8K4G0 201 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 HMSDA8MTL9 139 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 ZNF732B4DXR9 585 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 RFPL4AL1F8VTS6 287 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 M0R233 179 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 ARPC5O15511 151 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 SYNGR1O43759 233 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 PDCD6O75340 191 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 SFT2D2O95562 160 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 TSHBP01222 138 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 IFNA6P05013 189 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 ZNF14P17017 642 aaPredicted RBP3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 HLA-GP17693 338 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 COX5AP20674 150 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 BCL3P20749 454 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 CCNOP22674 350 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 DTYMKP23919 212 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 OPRM1P35372 400 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 APLNRP35414 380 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 NPBWR2P48146 333 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 GPM6AP51674 278 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 TAS2R31P59538 309 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 SSTP61278 116 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 SUPT4H1P63272 117 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 BAMBIQ13145 260 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 EXOSC2Q13868 293 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 ARL6IP1Q15041 203 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 IZUMO4Q1ZYL8 232 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 ANKRD55Q3KP44 614 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 NHLRC3Q5JS37 347 aa3.97□□□□□ -1.77
CTNNA1-212ENST00000518919 SPATA46Q5T0L3 261 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms