RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	VEGFC	P49767	419 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	ZNF134	P52741	427 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	SLC35B1	P78383	322 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	CD83	Q01151	205 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	FBLN7	Q53RD9	439 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	ZNF880	Q6PDB4	577 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	SPART	Q8N0X7	666 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	RASL11B	Q9BPW5	248 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	GON7	Q9BXV9	100 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	LIN7C	Q9NUP9	197 aa	Known RBP	19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	AK3	Q9UIJ7	227 aa		19.21	■□□□□ 0.67
CNOT7-204	ENST00000518885	IGHV3-72	A0A0B4J1Y9	119 aa		19.2	■□□□□ 0.66
CNOT7-204	ENST00000518885	PSMB11	A5LHX3	300 aa		19.2	■□□□□ 0.66
CNOT7-204	ENST00000518885	KCNAB3	O43448	404 aa		19.2	■□□□□ 0.66
CNOT7-204	ENST00000518885	GADD45A	P24522	165 aa		19.2	■□□□□ 0.66
CNOT7-204	ENST00000518885	CLDN12	P56749	244 aa		19.2	■□□□□ 0.66
CNOT7-204	ENST00000518885	HES5	Q5TA89	166 aa		19.2	■□□□□ 0.66
CNOT7-204	ENST00000518885	SLC35E3	Q7Z769	313 aa		19.2	■□□□□ 0.66
CNOT7-204	ENST00000518885		A0A0A6YYD4	124 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	SH2D7	A6NKC9	451 aa	Predicted RBP	19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	IFITM5	A6NNB3	132 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	PF4V1	P10720	104 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	GNMT	Q14749	295 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	FAM53A	Q6NSI3	398 aa	Predicted RBP	19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	FAM71F2	Q6NXP2	309 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885		Q8N6K4	173 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	EDARADD	Q8WWZ3	215 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	S1PR3	Q99500	378 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	CMSS1	Q9BQ75	279 aa	Known RBP	19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	PIPOX	Q9P0Z9	390 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	CMYA5	Q8N3K9	4069 aa		19.19	■□□□□ 0.66
CNOT7-204	ENST00000518885	WNK1	Q9H4A3	2382 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	METTL21EP	A6NDL7	271 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	HSPA12A	O43301	675 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	IGHG2	P01859	326 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	ZBTB25	P24278	435 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	C22orf42	Q6IC83	251 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	ZNF773	Q6PK81	442 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	COMMD1	Q8N668	190 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	ARHGAP5-AS1	Q96IT6	56 aa		19.18	■□□□□ 0.66
CNOT7-204	ENST00000518885	RRP9	O43818	475 aa	Known RBP	19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	RAB6A	P20340	208 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	FGF9	P31371	208 aa	Predicted RBP	19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	HLA-DRB3	P79483	266 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	LSAMP	Q13449	338 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	ARL6IP1	Q15041	203 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	KHDC1L	Q5JSQ8	128 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	RAB3C	Q96E17	227 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	PECR	Q9BY49	303 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	ABCG5	Q9H222	651 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	STUB1	Q9UNE7	303 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	SSR3	Q9UNL2	185 aa		19.17	■□□□□ 0.66
CNOT7-204	ENST00000518885	TMEM272	A0A1B0GTI8	110 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	FOXI3	A8MTJ6	420 aa	Predicted RBP	19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	AP4M1	O00189	453 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	ITGB1BP1	O14713	200 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	RAB29	O14966	203 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	LDLRAD4	O15165	306 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	CD3G	P09693	182 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	HIST2H2BD	Q6DRA6	164 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	PTX4	Q96A99	478 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	CENPO	Q9BU64	300 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885	SLC23A1	Q9UHI7	598 aa		19.16	■□□□□ 0.66
CNOT7-204	ENST00000518885		A0A1W2PRX2	142 aa		19.15	■□□□□ 0.66
CNOT7-204	ENST00000518885	TMEM50B	P56557	158 aa		19.15	■□□□□ 0.66
CNOT7-204	ENST00000518885	ZNF833P	Q6ZTB9	187 aa		19.15	■□□□□ 0.66
CNOT7-204	ENST00000518885	TPRA1	Q86W33	373 aa		19.15	■□□□□ 0.66
CNOT7-204	ENST00000518885		Q9N2K0	584 aa		19.15	■□□□□ 0.66
CNOT7-204	ENST00000518885	RRP15	Q9Y3B9	282 aa	Known RBP	19.15	■□□□□ 0.66
CNOT7-204	ENST00000518885	SAA2-SAA4	A0A096LPE2	208 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	ADARB2-AS1	A8MUL3	147 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	PF4	P02776	101 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	SAA2	P0DJI9	122 aa	Predicted RBP	19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	GPR12	P47775	334 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	SERPINB10	P48595	397 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	OR10A3	P58181	314 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	KIR2DS1	Q14954	304 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885		Q8N9W7	124 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	OR10R2	Q8NGX6	335 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	PHF21A	Q96BD5	680 aa		19.14	■□□□□ 0.65
CNOT7-204	ENST00000518885	WIPF1	O43516	503 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	SLC6A1	P30531	599 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	SOX6	P35712	828 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	CEACAM6	P40199	344 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	MMD	Q15546	238 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	KCTD21	Q4G0X4	260 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	PDLIM3	Q53GG5	364 aa	Predicted RBP	19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	ODF3L1	Q8IXM7	274 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	STPG2	Q8N412	459 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	ZNF251	Q9BRH9	671 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	HDHD3	Q9BSH5	251 aa	Predicted RBP	19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	MRPL20	Q9BYC9	149 aa	Known RBP	19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	ZFP57	Q9NU63	452 aa		19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	TXNL4B	Q9NX01	149 aa	Known RBP	19.13	■□□□□ 0.65
CNOT7-204	ENST00000518885	NOTO	A8MTQ0	251 aa		19.12	■□□□□ 0.65
CNOT7-204	ENST00000518885	ZNF736	B4DX44	427 aa	Predicted RBP	19.12	■□□□□ 0.65
CNOT7-204	ENST00000518885	TRDC	B7Z8K6	153 aa		19.12	■□□□□ 0.65
CNOT7-204	ENST00000518885	SCGN	O76038	276 aa		19.12	■□□□□ 0.65
CNOT7-204	ENST00000518885	OR4A4P	Q8NGN8	299 aa		19.12	■□□□□ 0.65
CNOT7-204	ENST00000518885	CYYR1	Q96J86	154 aa		19.12	■□□□□ 0.65

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms