RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 C3AR1Q16581 482 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 SPANXN5Q5MJ07 72 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 SPATA46Q5T0L3 261 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 DCAF12Q5T6F0 453 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 NUFIP2Q7Z417 695 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 LILRB2Q8N423 598 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 APH1AQ96BI3 265 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 OR4C12Q96R67 309 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 OR51I2Q9H344 312 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 RBKSQ9H477 322 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 KCNS2Q9ULS6 477 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 USF3Q68DE3 2245 aa14.02□□□□□ -0.17
PCDHGA11-202ENST00000518882 OR5B21A6NL26 309 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 CEBPZOSA8MTT3 80 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 NDUFS6O75380 124 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 IGKV1D-33P01593 117 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 IGKV1-33P01594 117 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 HNF4GQ14541 408 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 WDR61Q9GZS3 305 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 MPC1Q9Y5U8 109 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 MED13Q9UHV7 2174 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 SIRPB1O00241 398 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 GATCO43716 136 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 WDR1O75083 606 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 ARR3P36575 388 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 TLE1Q04724 770 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 TMEM41BQ5BJD5 291 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 WDR25Q64LD2 544 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 FAM173AQ9BQD7 235 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 VAX2Q9UIW0 290 aa14.01□□□□□ -0.17
PCDHGA11-202ENST00000518882 ELOA3CA0A087WX78 387 aaPredicted RBP14□□□□□ -0.17
PCDHGA11-202ENST00000518882 MAP1LC3B2A6NCE7 125 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 B4E171 279 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 SYNGR4O95473 234 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 CD55P08174 381 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 PGA5P0DJD9 388 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 FABP4P15090 132 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 TSPAN7P41732 249 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 HBG1P69891 147 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 HBG2P69892 147 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 SERF2P84101 59 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 C6orf15Q6UXA7 325 aaPredicted RBP14□□□□□ -0.17
PCDHGA11-202ENST00000518882 WDR86Q86TI4 376 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 P2RX4Q99571 388 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 MAP1LC3BQ9GZQ8 125 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 TMEM9BQ9NQ34 198 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 PRSS50Q9UI38 385 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 RNF150Q9ULK6 438 aa14□□□□□ -0.17
PCDHGA11-202ENST00000518882 RBM7Q9Y580 266 aaKnown RBP14□□□□□ -0.17
PCDHGA11-202ENST00000518882 UBE2L5PA0A1B0GUS4 154 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 OR5H1A6NKK0 313 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 LY86O95711 162 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 HIST1H1BP16401 226 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 PLP2Q04941 152 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 ZNF497Q6ZNH5 498 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 MRGPRGQ86SM5 289 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 VASH2Q86V25 355 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 TMEM105Q8N8V8 129 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 PKIBQ9C010 78 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 OPA3Q9H6K4 179 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 PTBP3O95758 552 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 OR2H2O95918 312 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 MT-CO3P00414 261 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 CD81P60033 236 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 RPP25LQ8N5L8 163 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 DRAM1Q8N682 238 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 TAF15Q92804 592 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 SNX22Q96L94 193 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 TTTY12Q9BZ98 90 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 LIN7CQ9NUP9 197 aaKnown RBP13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 TRAPPC2LQ9UL33 140 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 LOXL2Q9Y4K0 774 aa13.99□□□□□ -0.17
PCDHGA11-202ENST00000518882 TRBV24-1A0A075B6N3 115 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 PIGBOS1A0A0B4J2F0 54 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 IGHV3-64DA0A0J9YX35 117 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 LRP5LA4QPB2 252 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 J3QT63 122 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 ZNF737O75373 536 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 PDGFBP01127 241 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 APLNRP35414 380 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 GPX4P36969 197 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 CLN3Q13286 438 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 GAMTQ14353 236 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 ACSF3Q4G176 576 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 OR8G2PQ6IF36 304 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 FGFRL1Q8N441 504 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 SMOC1Q9H4F8 434 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 HMGB3O15347 200 aaKnown RBP13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 TDGF1P13385 188 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 HOXA6P31267 233 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 SLC38A11Q08AI6 406 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 RHOVQ96L33 236 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 C12orf49Q9H741 205 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 RYDENQ9NUL5 291 aaKnown RBP13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 PLA2G3Q9NZ20 509 aa13.98□□□□□ -0.17
PCDHGA11-202ENST00000518882 IL18BPO95998 194 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 CEACAM6P40199 344 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 CDH20Q9HBT6 801 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 B4GALT7Q9UBV7 327 aa13.97□□□□□ -0.17
PCDHGA11-202ENST00000518882 CACNA1DQ01668 2161 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms