RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 RAB40CQ96S21 281 aa15.55■□□□□ 0.08
SDC2-202ENST00000518385 PSMG3Q9BT73 122 aaPredicted RBP15.55■□□□□ 0.08
SDC2-202ENST00000518385 OBP2BQ9NPH6 170 aa15.55■□□□□ 0.08
SDC2-202ENST00000518385 CISD1Q9NZ45 108 aaKnown RBP15.55■□□□□ 0.08
SDC2-202ENST00000518385 MYO7BQ6PIF6 2116 aa15.55■□□□□ 0.08
SDC2-202ENST00000518385 LOC102723971A0A1B0GUV8 181 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 NKX2-6A6NCS4 301 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 FAM24AA6NFZ4 105 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 OR5B21A6NL26 309 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 ANKRD30BLA7E2S9 258 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 H0Y980 276 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 ANGPTL7O43827 346 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 C1QL1O75973 258 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 IFNA5P01569 189 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 CCL2P13500 99 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 TDGF1P3P51864 188 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 RPL23AP62750 156 aaKnown RBP15.54■□□□□ 0.08
SDC2-202ENST00000518385 MPV17LQ2QL34 196 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 NMSQ5H8A3 153 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 MED12LQ86YW9 2145 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 MKXQ8IYA7 352 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 C17orf78Q8N4C9 275 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 C9orf106Q8NAJ2 232 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 TP53RKQ96S44 253 aa15.54■□□□□ 0.08
SDC2-202ENST00000518385 MBD3L4A6NDZ8 208 aaPredicted RBP15.53■□□□□ 0.08
SDC2-202ENST00000518385 MBD3L3A6NE82 208 aaPredicted RBP15.53■□□□□ 0.08
SDC2-202ENST00000518385 MBD3L5A6NJ08 208 aaPredicted RBP15.53■□□□□ 0.08
SDC2-202ENST00000518385 GEMIN2O14893 280 aaKnown RBP15.53■□□□□ 0.08
SDC2-202ENST00000518385 NGFP01138 241 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 IFNA1P01562 189 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 WNT5AP41221 380 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 NPBWR2P48146 333 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 NDUFA6P56556 154 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 NCMAPQ5T1S8 102 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 CMTM1Q8IZ96 169 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 MBD3L2Q8NHZ7 208 aaPredicted RBP15.53■□□□□ 0.08
SDC2-202ENST00000518385 SNRNP40Q96DI7 357 aaKnown RBP15.53■□□□□ 0.08
SDC2-202ENST00000518385 ZNF442Q9H7R0 627 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 CDH20Q9HBT6 801 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 UFSP2Q9NUQ7 469 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 TRBV24-1A0A075B6N3 115 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 IGKV1-12A0A0C4DH73 117 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 A0A1B0GU03 582 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 CLDN34H7C241 214 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 WDR1O75083 606 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 TUSC2O75896 110 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 CYB5R3P00387 301 aaPredicted RBP15.53■□□□□ 0.08
SDC2-202ENST00000518385 IGKV1D-12P01611 117 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 OPN1MWP04001 364 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 OPN1MW2P0DN77 364 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 OPN1MW3P0DN78 364 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 HOXC12P31275 282 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 P2RY6Q15077 328 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 TBC1D26Q86UD7 250 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 GCNT2Q8N0V5 402 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 ZNF611Q8N823 705 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 CNEP1R1Q8N9A8 125 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 OR5C1Q8NGR4 320 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 FAM57AQ8TBR7 257 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 Q8WTZ3 238 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 MBD3L1Q8WWY6 194 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 RARRES2Q99969 163 aa15.53■□□□□ 0.08
SDC2-202ENST00000518385 TRBV6-6A0A0A6YYG2 114 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 SELEP16581 610 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 PKIAP61925 76 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 KLRB1Q12918 225 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 PYY3Q5JQD4 70 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 CLEC9AQ6UXN8 241 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 MEX3BQ6ZN04 569 aaKnown RBP15.52■□□□□ 0.07
SDC2-202ENST00000518385 ZNF573Q86YE8 665 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 C1orf174Q8IYL3 243 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 OR5R1Q8NH85 324 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 OR5P3Q8WZ94 311 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 BCL2L14Q9BZR8 327 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 PLK3Q9H4B4 646 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 Q9N2K0 584 aa15.52■□□□□ 0.07
SDC2-202ENST00000518385 CHD8Q9HCK8 2581 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 GNRHRP30968 328 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 HAAOP46952 286 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 DYNLT3P51808 116 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 PRSS12P56730 875 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 SERF2P84101 59 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 SLC25A26Q70HW3 274 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 FAM169BQ8N8A8 192 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 PINX1Q96BK5 328 aaKnown RBP15.51■□□□□ 0.07
SDC2-202ENST00000518385 PROCRQ9UNN8 238 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 MMP24Q9Y5R2 645 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 SVILO95425 2214 aa15.51■□□□□ 0.07
SDC2-202ENST00000518385 GPR37O15354 613 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 SSSCA1O60232 199 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 HIST1H2BKO60814 126 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 NAPSAO96009 420 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 HIST1H2BJP06899 126 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 SFTPCP11686 197 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 RAC2P15153 192 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 HIST1H2BOP23527 126 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 HIST1H2BBP33778 126 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 HIST1H2BDP58876 126 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 HIST1H2BCP62807 126 aa15.5■□□□□ 0.07
SDC2-202ENST00000518385 GNG3P63215 75 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms