RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 IGKV1D-43A0A0B4J1Z2 117 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 LOC102723971A0A1B0GUV8 181 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 A0A1W2PP11 408 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 hCG_1809904A0A1W2PP81 198 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 A0A1W2PPE2 198 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 A0A1W2PR64 198 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 A0A1W2PRV1 198 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 C20orf202A1L168 122 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 MSGN1A6NI15 193 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 LRRC30A6NM36 301 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 FAM90A9PA6NNJ1 464 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 FAM166BA8MTA8 275 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 FOXI3A8MTJ6 420 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 C21orf140B9A014 251 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 C11orf94C9JXX5 98 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 J3QT63 122 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 K7N7A8 449 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 IFNL4K9M1U5 179 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 AQP7O14520 342 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TCAPO15273 167 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SLC25A17O43808 307 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 GDF9O60383 454 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 WDR1O75083 606 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SCGB2A1O75556 95 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 KBTBD11O94819 623 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 YIF1AO95070 293 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TNFSF15O95150 251 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 IGLV3-1P01715 115 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 IGHV2-5P01817 119 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CRYABP02511 175 aaKnown RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 PF4P02776 101 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 MT-ND6P03923 174 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CTSBP07858 339 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 WNT2P09544 360 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SCTP09683 121 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 BCL2P10415 239 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 IRF2P14316 349 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 DAOP14920 347 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 B4GALT1P15291 398 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CRISP2P16562 243 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 BCL3P20749 454 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 IL11P20809 199 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TNFSF4P23510 183 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CD1BP29016 333 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 EPHA8P29322 1005 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 DDTP30046 118 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ARL3P36405 182 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 AKR1C3P42330 323 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 GPR12P47775 334 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 PCP4P48539 62 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CDC34P49427 236 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 RAB7AP51149 207 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 GPM6AP51674 278 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CNN1P51911 297 aaKnown RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 RND2P52198 227 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ERVFC1-1P60608 527 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SPCS3P61009 180 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SUMO1P63165 101 aaKnown RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TNFRSF9Q07011 255 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF154Q13106 437 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ODF1Q14990 250 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 JOSD1Q15040 202 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 PCOLCEQ15113 449 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SMAD2Q15796 467 aaKnown RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 PMCHL1Q16048 86 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TMEM183BQ1AE95 376 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 RPEL1Q2QD12 228 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SNAI3Q3KNW1 292 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 PIGYQ3MUY2 71 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TIGITQ495A1 244 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 IGSF11Q5DX21 431 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CXorf66Q5JRM2 361 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 WIPI1Q5MNZ9 446 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 FFAR4Q5NUL3 377 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 PHYHD1Q5SRE7 291 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 C9orf50Q5SZB4 431 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 NCMAPQ5T1S8 102 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CDCP2Q5VXM1 449 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 OTPQ5XKR4 325 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 FBXW9Q5XUX1 488 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SLC35E4Q6ICL7 350 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 OR8G2PQ6IF36 304 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ETFRF1Q6IPR1 90 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CLEC9AQ6UXN8 241 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF705AQ6ZN79 300 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF818PQ6ZRF7 136 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 C19orf35Q6ZS72 473 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SSX8Q7RTT4 187 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 C1QL2Q7Z5L3 287 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CENPVQ7Z7K6 275 aaPredicted RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 YRDCQ86U90 279 aaKnown RBP1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 BAGE3Q86Y29 109 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 BAGE2Q86Y30 109 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF295-AS1Q8N0V1 137 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 TMEM123Q8N131 208 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF645Q8N7E2 425 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 SIGLECL1Q8N7X8 197 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 CYB561D1Q8N8Q1 229 aa1.77□□□□□ -2.13
RNU1-40P-201ENST00000516816 STXBP6Q8NFX7 210 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms