RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 RPEQ96AT9 228 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 COQ2Q96H96 371 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CCL19Q99731 98 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 SLC2A9Q9NRM0 540 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 CHMP2BQ9UQN3 213 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 KNSTRNQ9Y448 316 aa-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 KIAA0100Q14667 2235 aaKnown RBP-3.32□□□□□ -2.94
RNU6-539P-201ENST00000516665 REREQ9P2R6 1566 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 TRAV38-1A0A0B4J264 116 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 TRBV6-4A0A1B0GX49 114 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 CCDC160A6NGH7 325 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 GTF2H1P32780 548 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 CRATP43155 626 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 IFNAR2P48551 515 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR2B8PP59922 312 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 MYO7BQ6PIF6 2116 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 NIPA1Q7RTP0 329 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 SDR9C7Q8NEX9 313 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR4D11Q8NGI4 311 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 ECHDC3Q96DC8 303 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 TMA16Q96EY4 203 aaKnown RBP-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 IMMP2LQ96T52 175 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 MIXL1Q9H2W2 232 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 C11orf49Q9H6J7 331 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 SDHAF3Q9NRP4 125 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 RASL12Q9NYN1 266 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 HS3ST2Q9Y278 367 aa-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 RBM7Q9Y580 266 aaKnown RBP-3.33□□□□□ -2.94
RNU6-539P-201ENST00000516665 A0A0D9SG52 128 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 A0A1W2PPE3 182 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 GOLGA6L19H0YKK7 550 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 GOLGA8SH3BPF8 625 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 J3QT63 122 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 FAAHO00519 579 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 TXNDC9O14530 226 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 APOA4P06727 396 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 ASAH2BP0C7U1 165 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 NPPCP23582 126 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 OPRM1P35372 400 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 C2orf80Q0P641 193 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 CLEC12BQ2HXU8 276 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 IBA57Q5T440 356 aaKnown RBP-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 FAM162BQ5T6X4 162 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 Q6ZQY7 126 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 OOSP2Q86WS3 158 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 SLC13A5Q86YT5 568 aaPredicted RBP-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 Q8IZM0 81 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 OR6K3Q8NGY3 331 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 PSMA8Q8TAA3 256 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 CCDC126Q96EE4 140 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 SLC29A1Q99808 456 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 THUMPD2Q9BTF0 503 aaKnown RBP-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 XPO4Q9C0E2 1151 aaKnown RBP-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 LPAR5Q9H1C0 372 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 TAS2R4Q9NYW5 299 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 TAAR3PQ9P1P4 343 aa-3.34□□□□□ -2.94
RNU6-539P-201ENST00000516665 NCAPD2Q15021 1401 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 K7EQZ3 153 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 CYB5BO43169 146 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 RLN2P04090 185 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 SFTPCP11686 197 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 TNNI3P19429 210 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 PSMB8P28062 276 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 PPP1CCP36873 323 aaKnown RBP-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 TGFBIQ15582 683 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 SPINK13Q1W4C9 94 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 RPEL1Q2QD12 228 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 NADK2Q4G0N4 442 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 C1orf137Q5JT78 98 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCDC183Q5T5S1 534 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 EFL1Q7Z2Z2 1120 aaKnown RBP-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 SLC7A5P1Q8MH63 180 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 LSMEM1Q8N8F7 131 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 WDR55Q9H6Y2 383 aaPredicted RBP-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCNB1IP1Q9NPC3 277 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 SLC35D1Q9NTN3 355 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCDC59Q9P031 241 aaKnown RBP-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 KLF12Q9Y4X4 402 aa-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 DDX49Q9Y6V7 483 aaKnown RBP-3.35□□□□□ -2.95
RNU6-539P-201ENST00000516665 H3BT86 120 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 CRXO43186 299 aaPredicted RBP-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 ATP8B1O43520 1251 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 CCNB2O95067 398 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 PSMG1O95456 288 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 TAS2R30P59541 319 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 HIST1H4AP62805 103 aaKnown RBP-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 STX5Q13190 355 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 Q499Y3 187 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 HAGHLQ6PII5 290 aaPredicted RBP-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 CRLF3Q8IUI8 442 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 GPR151Q8TDV0 419 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 ASZ1Q8WWH4 475 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 LINC01587Q99440 93 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 OR51M1Q9H341 326 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 CRLF2Q9HC73 371 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 SLC39A9Q9NUM3 307 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 BAIAP2Q9UQB8 552 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 ALG5Q9Y673 324 aa-3.36□□□□□ -2.95
RNU6-539P-201ENST00000516665 TANC1Q9C0D5 1861 aa-3.37□□□□□ -2.95
RNU6-539P-201ENST00000516665 BIVM-ERCC5R4GMW8 1640 aa-3.37□□□□□ -2.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms