RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SP6Q3SY56 376 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LY6G6FQ5SQ64 297 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 DCAF12L2Q5VW00 463 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LIAT1Q6ZQX7 453 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TCF23Q7RTU1 214 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LDLRAD3Q86YD5 345 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LGI3Q8N145 548 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 DRAM1Q8N682 238 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF645Q8N7E2 425 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZBTB34Q8NCN2 500 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 FAM216AQ8WUB2 273 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 HYLS1Q96M11 299 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 YPEL2Q96QA6 119 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GAL3ST2Q9H3Q3 398 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 METTL8Q9H825 291 aaKnown RBP6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LINC00574Q9H8X3 128 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CHODLQ9H9P2 273 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TAS2R3Q9NYW6 316 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IDI2-AS1Q9NZ38 188 aa6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CHD6Q8TD26 2715 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 DCHS2Q6V1P9 2916 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TRBV23-1A0A0A0MS06 115 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PIGBOS1A0A0B4J2F0 54 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 C13orf42A0A1B0GVH6 325 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 RNF212BA8MTL3 300 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 H0Y980 276 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ITGB1BP1O14713 200 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GPR37O15354 613 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TNFSF12O43508 249 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PGLYRP1O75594 196 aaPredicted RBP6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 FCN3O75636 299 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ADAP1O75689 374 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 B3GALNT1O75752 331 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IFNA21P01568 189 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 HOXB5P09067 269 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 COX6B1P14854 86 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OMGP23515 440 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 F2RP25116 425 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 NFYBP25208 207 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LOXL3P58215 753 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CYCSP99999 105 aaKnown RBP6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SRSF4Q08170 494 aaKnown RBP6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 MSMO1Q15800 293 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TMEM155Q4W5P6 130 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 MORN2Q502X0 79 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TMEM200BQ69YZ2 307 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 FAM53AQ6NSI3 398 aaPredicted RBP6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LRTM2Q8N967 370 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR10A7Q8NGE5 316 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR8B3Q8NGG8 313 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR52M1Q8NGK5 317 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GLYATL2Q8WU03 294 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 RAB39BQ96DA2 213 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 NEIL1Q96FI4 390 aaPredicted RBP6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 WDR89Q96FK6 387 aaPredicted RBP6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SEC22AQ96IW7 307 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF714Q96N38 554 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR8B2Q96RD0 313 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TP53RKQ96S44 253 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GPHA2Q96T91 129 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TMEM222Q9H0R3 208 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR2D2Q9H210 308 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PLEKHF2Q9H8W4 249 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 LIN7CQ9NUP9 197 aaKnown RBP6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GFOD1Q9NXC2 390 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 COMMD9Q9P000 198 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 MIOXQ9UGB7 285 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 RNF150Q9ULK6 438 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PSG11Q9UQ72 335 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 USF3Q68DE3 2245 aa6.31□□□□□ -1.4
SCARNA20.1-201ENST00000516009 A1L4Q6 167 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 G3V3Q6 166 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OVOL3O00110 214 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ST8SIA5O15466 376 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 NDUFS7O75251 213 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 WNT2P09544 360 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CCL3L1P16619 93 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 UCP1P25874 307 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GPR6P46095 362 aaPredicted RBP6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 GPR12P47775 334 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 RAB7AP51149 207 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 FGL1Q08830 312 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CATR1Q13166 79 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF273Q14593 569 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 PRAMEF5Q5TYX0 476 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TMEM268Q5VZI3 342 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 SP5Q6BEB4 398 aaPredicted RBP6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ZNF695Q8IW36 515 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 OR51H1Q8NH63 302 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 MSI2Q96DH6 328 aaKnown RBP6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 ABHD14BQ96IU4 210 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 C18orf12Q96KH6 178 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 C2orf50Q96LR7 162 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 TMEM56Q96MV1 263 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 CCL19Q99731 98 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 NMES1Q9C002 83 aa6.3□□□□□ -1.4
SCARNA20.1-201ENST00000516009 RPUSD1Q9UJJ7 312 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms