RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 OR51E2Q9H255 320 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 OR1A1Q9P1Q5 309 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 STEAP1Q9UHE8 339 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 RNF150Q9ULK6 438 aa9.11□□□□□ -0.95
VCAN-212ENST00000515397 TRAV1-2A0A0B4J238 106 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 PDCD5O14737 125 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 LDLRAD4O15165 306 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 PRB2P02812 416 aaPredicted RBP9.1□□□□□ -0.95
VCAN-212ENST00000515397 CD3GP09693 182 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 CLEC2LP0C7M8 214 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 RAB3BP20337 219 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 MYL9P24844 172 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 CD83Q01151 205 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 HMGN3Q15651 99 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 RPL39P5Q59GN2 51 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 KHDC1LQ5JSQ8 128 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 ZNF880Q6PDB4 577 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 ODF3L1Q8IXM7 274 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 C8orf31Q8N9H6 132 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 OR2T10Q8NGZ9 312 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 MAFIPQ8WZ33 124 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 ABHD14AQ9BUJ0 271 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 MRPL20Q9BYC9 149 aaKnown RBP9.1□□□□□ -0.95
VCAN-212ENST00000515397 RAB9BQ9NP90 201 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 PLSCR3Q9NRY6 295 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 TXNL4BQ9NX01 149 aaKnown RBP9.1□□□□□ -0.95
VCAN-212ENST00000515397 ABRACLQ9P1F3 81 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 ELF5Q9UKW6 265 aaPredicted RBP9.1□□□□□ -0.95
VCAN-212ENST00000515397 RAB22AQ9UL26 194 aa9.1□□□□□ -0.95
VCAN-212ENST00000515397 IFITM5A6NNB3 132 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 SERPINE3A8MV23 424 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 M0QZK8 103 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 YPEL1O60688 119 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 MOSP00540 346 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 SNRPBP14678 240 aaKnown RBP9.09□□□□□ -0.95
VCAN-212ENST00000515397 GNB3P16520 340 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 CNTFRP26992 372 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 CD1BP29016 333 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 CEACAM6P40199 344 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 PSMD7P51665 324 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 LINC00205P59089 165 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 HTD2P86397 168 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 EBI3Q14213 229 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 NEDD8Q15843 81 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 ZNF773Q6PK81 442 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 GLDNQ6ZMI3 551 aaPredicted RBP9.09□□□□□ -0.95
VCAN-212ENST00000515397 LCNL1Q6ZST4 164 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 C18orf65Q6ZTR6 163 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 NDUFA11Q86Y39 141 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 Q8N6K4 173 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 Q8N9W7 124 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 OR2AK2Q8NG84 335 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 OR56B1Q8NGI3 324 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 ABHD14BQ96IU4 210 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 YPEL2Q96QA6 119 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 CMSS1Q9BQ75 279 aaKnown RBP9.09□□□□□ -0.95
VCAN-212ENST00000515397 YTHDF1Q9BYJ9 559 aaKnown RBP9.09□□□□□ -0.95
VCAN-212ENST00000515397 Q9N2K0 584 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 SLC23A1Q9UHI7 598 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 ZNF230Q9UIE0 474 aaPredicted RBP9.09□□□□□ -0.95
VCAN-212ENST00000515397 JPT1Q9UK76 154 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 KCNK7Q9Y2U2 307 aa9.09□□□□□ -0.95
VCAN-212ENST00000515397 TGP01266 2768 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 SAA2-SAA4A0A096LPE2 208 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 IGKV1-6A0A0C4DH72 117 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 LOC100506127A0A0U1RQW1 187 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 PSMB11A5LHX3 300 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 LANCL1O43813 399 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 MRPS14O60783 128 aaKnown RBP9.08□□□□□ -0.96
VCAN-212ENST00000515397 OPN1MWP04001 364 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 SAA2P0DJI9 122 aaPredicted RBP9.08□□□□□ -0.96
VCAN-212ENST00000515397 OPN1MW2P0DN77 364 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 OPN1MW3P0DN78 364 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 GADD45AP24522 165 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 ZNF137PP52743 207 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 MXD1Q05195 221 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 LSAMPQ13449 338 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 Q3ZCU0 254 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 OXLD1Q5BKU9 147 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 STEAP3Q658P3 488 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 SLC35E3Q7Z769 313 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 IZUMO1Q8IYV9 350 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 RAB3CQ96E17 227 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 S1PR3Q99500 378 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 NABP2Q9BQ15 211 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 HSPB9Q9BQS6 159 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 CHCHD6Q9BRQ6 235 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 C11orf54Q9H0W9 315 aaPredicted RBP9.08□□□□□ -0.96
VCAN-212ENST00000515397 IFI27L2Q9H2X8 130 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 HSF4Q9ULV5 492 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 SSR3Q9UNL2 185 aa9.08□□□□□ -0.96
VCAN-212ENST00000515397 HSPA12AO43301 675 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 FGF16O43320 207 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 RGS11O94810 467 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 SDC2P34741 201 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 GPR12P47775 334 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 HLA-DRB3P79483 266 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 TMEM30BQ3MIR4 351 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 IGSF11Q5DX21 431 aa9.07□□□□□ -0.96
VCAN-212ENST00000515397 ZNF554Q86TJ5 538 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms