RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 RND3P61587 244 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 ACER2Q5QJU3 275 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 FAM222BQ8WU58 562 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 MGPP08493 103 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 FCGR3AP08637 254 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 P2RY4P51582 365 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 GGTLC2Q14390 218 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 ZNF788Q6ZQV5 615 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 P2RX4Q99571 388 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 CABIN1Q9Y6J0 2220 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 CD74P04233 296 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 OR4A8P0C604 315 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 OR10S1Q8NGN2 331 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 WFIKKN1Q96NZ8 548 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 APCDD1LQ8NCL9 501 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 RARRES2Q99969 163 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 SOSTQ9BQB4 213 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 PAXXQ9BUH6 204 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 NPIPB9F8W1W9 429 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 J3KRW8 73 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 ID4P47928 161 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 CD200R1LQ6Q8B3 271 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 GFRALQ6UXV0 394 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 FBLIM1Q8WUP2 373 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 SLC25A38Q96DW6 304 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 RNF122Q9H9V4 155 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 SMCHD1A6NHR9 2005 aa11.58□□□□□ -0.56
TCOF1-214ENST00000515035 BGLAPP02818 100 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 OTX1P32242 354 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-214ENST00000515035 CEACAM3P40198 252 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 COX14Q96I36 57 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 NPVFQ9HCQ7 196 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 AMMECR1Q9Y4X0 333 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-214ENST00000515035 LY75O60449 1722 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 SYNGR1O43759 233 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 C1QCP02747 245 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 HARBI1Q96MB7 349 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 ASCL3Q9NQ33 180 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 GSN-AS1Q9NRJ2 163 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 FOXJ2Q9P0K8 574 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 KIF13BQ9NQT8 1826 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 DNASE2O00115 360 aaPredicted RBP11.57□□□□□ -0.56
TCOF1-214ENST00000515035 AGAP20933 346 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 SCGB1A1P11684 91 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 SF3B5Q9BWJ5 86 aaKnown RBP11.57□□□□□ -0.56
TCOF1-214ENST00000515035 PARLQ9H300 379 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 CLEC1BQ9P126 229 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 TINAGQ9UJW2 476 aa11.57□□□□□ -0.56
TCOF1-214ENST00000515035 H7C2G1 150 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 J3QR06 171 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 CD160O95971 181 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 COX6CP09669 75 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 FSTP19883 344 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 PRNTQ86SH4 94 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 Q8WTZ3 238 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 MBD1Q9UIS9 605 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-214ENST00000515035 HRKO00198 91 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 KIR2DL1P43626 348 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-214ENST00000515035 KIR2DL2P43627 348 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-214ENST00000515035 SNRPCP09234 159 aaKnown RBP11.56□□□□□ -0.56
TCOF1-214ENST00000515035 FOLR2P14207 255 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 ERVFRD-1P60508 538 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 SSPNQ14714 243 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 TTC32Q5I0X7 151 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 SPANXN1Q5VSR9 72 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 WDR31Q8NA23 367 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 OR1L8Q8NGR8 309 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 COL4A5P29400 1685 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 LOC105371267A0A1B0GV96 52 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 OR2H1Q9GZK4 316 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 TMEM222Q9H0R3 208 aa11.56□□□□□ -0.56
TCOF1-214ENST00000515035 NPDC1Q9NQX5 325 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-214ENST00000515035 A0A1W2PP11 408 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 KBTBD11O94819 623 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 SRIP30626 198 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 RBM11P57052 281 aaKnown RBP11.55□□□□□ -0.56
TCOF1-214ENST00000515035 CTAG1AP78358 180 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 CXorf66Q5JRM2 361 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-214ENST00000515035 DNLZQ5SXM8 178 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 ARL6IP6Q8N6S5 226 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 LINC00469Q8N7U9 141 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 TMPRSS2O15393 492 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 MPDU1O75352 247 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 GLIPR1P48060 266 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 TAS2R60P59551 318 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 TAF15Q92804 592 aaKnown RBP eCLIP11.55□□□□□ -0.56
TCOF1-214ENST00000515035 TRBV5-5A0A0J9YX44 114 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 CENPVL1A0A0U1RR11 272 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 DHRS7CA6NNS2 312 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 HOXA4Q00056 320 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-214ENST00000515035 SRSF5Q13243 272 aaKnown RBP11.55□□□□□ -0.56
TCOF1-214ENST00000515035 ATOH7Q8N100 152 aa11.55□□□□□ -0.56
TCOF1-214ENST00000515035 MTURNQ8N3F0 131 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms