RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 DTYMKP23919 212 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 ZNF134P52741 427 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 BAMBIQ13145 260 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 ARL6IP1Q15041 203 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 MIDNQ504T8 468 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 FBLN7Q53RD9 439 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 OR10A7Q8NGE5 316 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 ZNF418Q8TF45 676 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 TAF15Q92804 592 aaKnown RBP eCLIP7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 SNAPC3Q92966 411 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 GALMQ96C23 342 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 NXF2Q9GZY0 626 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 MMP28Q9H239 520 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 JPT1Q9UK76 154 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 JMJD1CQ15652 2540 aa7.93□□□□□ -1.14
TOPBP1-209ENST00000513818 HSPA12AO43301 675 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 CD24P25063 80 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 HTR1DP28221 377 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 KIR2DS4P43632 304 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 RAB13P51153 203 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 KIR2DS1Q14954 304 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 LY6EQ16553 131 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 MORN2Q502X0 79 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 CT45A1Q5HYN5 189 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 TPTE2P1Q5T6R2 138 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 RBMS3Q6XE24 437 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 ZNF554Q86TJ5 538 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 LYG1Q8N1E2 194 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 ZDHHC22Q8N966 263 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 BEND2Q8NDZ0 799 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 OR52M1Q8NGK5 317 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 OR10X1Q8NGY0 326 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 CT45A3Q8NHU0 189 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 ZNF596Q8TC21 504 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 CREB3L1Q96BA8 519 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 DGCR14Q96DF8 476 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 DIRAS2Q96HU8 199 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 ABHD14BQ96IU4 210 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 CMTM3Q96MX0 182 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 CABLES2Q9BTV7 478 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 ABHD14AQ9BUJ0 271 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 RAB9BQ9NP90 201 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 IFT46Q9NQC8 304 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 ADAM30Q9UKF2 790 aa7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 TBL2Q9Y4P3 447 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-209ENST00000513818 IGHV3-72A0A0B4J1Y9 119 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 BUB1B-PAK6H3BSN5 160 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 H3BUX3 64 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 TCF21O43680 179 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 YPEL1O60688 119 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 TNFSF8P32971 234 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 PRSS3P35030 304 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 CEACAM6P40199 344 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 OR3A3P47888 321 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 PRRX1P54821 245 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 BPIFB3P59826 476 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 HILS1P60008 231 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 HTD2P86397 168 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 DGCR2P98153 550 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 PITPNAQ00169 270 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 SCGB2A2Q13296 93 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 IL18Q14116 193 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 SLC9A3R2Q15599 337 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 STEAP3Q658P3 488 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 CFAP161Q6P656 301 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 HOGA1Q86XE5 327 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 BEST4Q8NFU0 473 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 OR2AK2Q8NG84 335 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 OR4A4PQ8NGN8 299 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 OR52I2Q8NH67 350 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 TOMM40LQ969M1 308 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 TRIM63Q969Q1 353 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 YPEL2Q96QA6 119 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 ABHD1Q96SE0 405 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 IFI27L2Q9H2X8 130 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 RDH8Q9NYR8 311 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 NDUFA13Q9P0J0 144 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 DPM3Q9P2X0 92 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 ANXA10Q9UJ72 324 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 MGAT4AQ9UM21 535 aa7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 AMMECR1Q9Y4X0 333 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-209ENST00000513818 C2CD3Q4AC94 2353 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 TRBV6-7A0A0A0MS04 114 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 A0A1W2PPI3 338 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 LEUTXA8MZ59 168 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 LY6LH3BQJ8 138 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 HSD17B6O14756 317 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 LPLP06858 475 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 NFYAP23511 347 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 ZBTB25P24278 435 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 ARPC4P59998 168 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 UBA52P62987 128 aaKnown RBP7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 LRRC75BQ2VPJ9 315 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 CNPY1Q3B7I2 92 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 TMEM30BQ3MIR4 351 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 RPL39P5Q59GN2 51 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 Q6YL49 198 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 Q6ZS49 121 aa7.9□□□□□ -1.14
TOPBP1-209ENST00000513818 SLC25A48Q6ZT89 311 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms