RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 IL20Q9NYY1 176 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 NDUFAF4Q9P032 175 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 RCC2Q9P258 522 aaKnown RBP6.65□□□□□ -1.34
CLCN3-208ENST00000512813 TMED3Q9Y3Q3 217 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 FAM32AQ9Y421 112 aaKnown RBP6.65□□□□□ -1.34
CLCN3-208ENST00000512813 MUC2Q02817 5179 aa6.65□□□□□ -1.34
CLCN3-208ENST00000512813 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 OR4C46A6NHA9 309 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 RIIAD1A6NNX1 92 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-208ENST00000512813 FXYD1O00168 92 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 ZNF254O75437 659 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 RBBP9O75884 186 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 IFNGP01579 166 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 PLA2G1BP04054 148 aaKnown RBP6.64□□□□□ -1.35
CLCN3-208ENST00000512813 NUDT2P50583 147 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 MTCP1P56278 107 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 SSBP2P81877 361 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-208ENST00000512813 RHOGP84095 191 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 ROM1Q03395 351 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 CYLC2Q14093 348 aaPredicted RBP6.64□□□□□ -1.35
CLCN3-208ENST00000512813 ZNF124Q15973 351 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 BCL2L15Q5TBC7 163 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 ZNF833PQ6ZTB9 187 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 OR2T12Q8NG77 320 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 CNIH3Q8TBE1 160 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
CLCN3-208ENST00000512813 GNG12Q9UBI6 72 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 LAMP5Q9UJQ1 280 aa6.64□□□□□ -1.35
CLCN3-208ENST00000512813 C15orf61A6NNL5 157 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 ZNF705EA8MWA4 302 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-208ENST00000512813 FAM90A23PA8MXZ1 464 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 PRR32B1ATL7 298 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 SERPINA3P01011 423 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 NPY1RP25929 384 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 EPHA2P29317 976 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 IFNGR2P38484 337 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 RIDAP52758 137 aaKnown RBP6.63□□□□□ -1.35
CLCN3-208ENST00000512813 ATP5G2Q06055 141 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 METTL21CQ5VZV1 264 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 ZNF679Q8IYX0 411 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 OR10V1Q8NGI7 309 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 OR1L1Q8NH94 360 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 FAM46BQ96A09 425 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 SULT4A1Q9BR01 284 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 CCDC28BQ9BUN5 200 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 GTF2A1LQ9UNN4 478 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 BAIAP2Q9UQB8 552 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 X6R8D5 127 aa6.63□□□□□ -1.35
CLCN3-208ENST00000512813 TRBV9A0A0B4J1U6 114 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 IGKV1-9A0A0C4DH69 117 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 TMEM30CPA0ZSE6 113 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 ZNF320A2RRD8 509 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 SULT1B1O43704 296 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 DIRAS1O95057 198 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 SPDEFO95238 335 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 FADS2O95864 444 aaKnown RBP6.62□□□□□ -1.35
CLCN3-208ENST00000512813 T-ENOLP0DO92 83 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 FUSP35637 526 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLCN3-208ENST00000512813 RPS27AP62979 156 aaKnown RBP6.62□□□□□ -1.35
CLCN3-208ENST00000512813 HAMPP81172 84 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 MED21Q13503 144 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 PSG5Q15238 335 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 FAM106AQ4KMX7 169 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 ATAD3CQ5T2N8 411 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 MORN3Q6PF18 240 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-208ENST00000512813 SAXO1Q8IYX7 474 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 GNPDA2Q8TDQ7 276 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 RNF5Q99942 180 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 EBF4Q9BQW3 602 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 ABHD14AQ9BUJ0 271 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 ALG8Q9BVK2 526 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 CMC2Q9NRP2 79 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 MRPL27Q9P0M9 148 aaKnown RBP6.62□□□□□ -1.35
CLCN3-208ENST00000512813 OR52A1Q9UKL2 312 aa6.62□□□□□ -1.35
CLCN3-208ENST00000512813 OR5H14A6NHG9 310 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 FAM90A7PA6NKC0 464 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 GADD45GO95257 159 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 GSTP1P09211 210 aaKnown RBP6.61□□□□□ -1.35
CLCN3-208ENST00000512813 FUT3P21217 361 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 PRKACBP22694 351 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 ALKBH1Q13686 389 aaKnown RBP6.61□□□□□ -1.35
CLCN3-208ENST00000512813 ZNF585BQ52M93 769 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 SAMD4BQ5PRF9 694 aaKnown RBP6.61□□□□□ -1.35
CLCN3-208ENST00000512813 LIPKQ5VXJ0 399 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 C17orf53Q8N3J3 647 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-208ENST00000512813 PRR18Q8N4B5 295 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 MNS1Q8NEH6 495 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 OR2T33Q8NG76 320 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 PP6455Q8WZ26 134 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 RFT1Q96AA3 541 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 PAIP2Q9BPZ3 127 aaKnown RBP6.61□□□□□ -1.35
CLCN3-208ENST00000512813 ATG101Q9BSB4 218 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 TSSK6Q9BXA6 273 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 ROPN1BQ9BZX4 212 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-208ENST00000512813 OR51V1Q9H2C8 321 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 RAB9BQ9NP90 201 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 R4GMQ9 66 aa6.61□□□□□ -1.35
CLCN3-208ENST00000512813 SAA2-SAA4A0A096LPE2 208 aa6.6□□□□□ -1.35
CLCN3-208ENST00000512813 A0A1B0GW64 132 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms