RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ABCA13Q86UQ4 5058 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 LAMB4A4D0S4 1761 aa0.06□□□□□ -2.4
PDGFC-208ENST00000512711 PLCH2O75038 1416 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 RP1P56715 2156 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 HYDINQ4G0P3 5121 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 EML5Q05BV3 1969 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 GRIFINA4D1Z8 144 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 E7EWF7 191 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 TMEM250H0YL14 139 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 BOLA2-SMG1P6H3BVE0 249 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 MRPS14O60783 128 aaKnown RBP0.05□□□□□ -2.4
PDGFC-208ENST00000512711 NPPAP01160 153 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 CD8AP01732 235 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 FGF4P08620 206 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF728P0DKX0 622 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 IGHV3-30-3P0DP02 117 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 ORM2P19652 201 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 GALP22466 123 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 CRHBPP24387 322 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 RANBP1P43487 201 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 TSPEAR-AS2P59090 65 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 SPAG1Q07617 926 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 LRRC75BQ2VPJ9 315 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 HIKESHIQ53FT3 197 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 TMEM31Q5JXX7 168 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.05□□□□□ -2.4
PDGFC-208ENST00000512711 PIP5KL1Q5T9C9 394 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 TMEM42Q69YG0 159 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 HBMQ6B0K9 141 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 DOLPP1Q86YN1 238 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 PDCL2Q8N4E4 241 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 LFNGQ8NES3 379 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 OR4K17Q8NGC6 315 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 OR5D18Q8NGL1 313 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 OR11L1Q8NGX0 322 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 ZMYND19Q96E35 227 aaPredicted RBP0.05□□□□□ -2.4
PDGFC-208ENST00000512711 PGLYRP3Q96LB9 341 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 ACBD6Q9BR61 282 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 MED18Q9BUE0 208 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 CHID1Q9BWS9 393 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 C1QTNF6Q9BXI9 259 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 EBPLQ9BY08 206 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 CHST5Q9GZS9 411 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 BLZF1Q9H2G9 400 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 GOLPH3Q9H4A6 298 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 ANKHQ9HCJ1 492 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 NRBP2Q9NSY0 501 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 MED9Q9NWA0 146 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 TAS2R13Q9NYV9 303 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 DNAJC12Q9UKB3 198 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 HHLA3Q9XRX5 114 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 PHLPP2Q6ZVD8 1323 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 ALPK2Q86TB3 2170 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 ZNF462Q96JM2 2506 aa0.05□□□□□ -2.4
PDGFC-208ENST00000512711 DSCAMO60469 2012 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 MYO5BQ9ULV0 1848 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DISP1Q96F81 1524 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 MEIKINA0A087WXM9 373 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 TRGV5A0A0B4J1U4 118 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 A0A1W2PQD3 144 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 LINC00862A6NCI5 91 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 MGAT4DA6NG13 374 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 OR5K4A6NMS3 321 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 OR11H12B2RN74 326 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 F8W036 122 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 SLC17A3O00476 420 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 TXNDC9O14530 226 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 GEMIN2O14893 280 aaKnown RBP0.04□□□□□ -2.4
PDGFC-208ENST00000512711 UBE2L6O14933 153 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 UBDO15205 165 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 SCN2BO60939 215 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 ZMPSTE24O75844 475 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 VAPBO95292 243 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 IGHV1-69P01742 117 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 MBP02144 154 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 RPSAP08865 295 aaKnown RBP0.04□□□□□ -2.4
PDGFC-208ENST00000512711 AKR1C4P17516 323 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 ATP6V0CP27449 155 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 TSPOP30536 169 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DEKP35659 375 aaKnown RBP0.04□□□□□ -2.4
PDGFC-208ENST00000512711 CCR2P41597 374 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 ACTR1BP42025 376 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 REG1BP48304 166 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DNASE1L1P49184 302 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 CDK9P50750 372 aaKnown RBP0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DAOAP59103 153 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DSTNP60981 165 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 FAM3AP98173 230 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 BAXQ07812 192 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 LRRC74AQ0VAA2 488 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 XRCC4Q13426 336 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 TRIP13Q15645 432 aaPredicted RBP0.04□□□□□ -2.4
PDGFC-208ENST00000512711 LGALS9BQ3B8N2 356 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 ACTL10Q5JWF8 245 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 C6orf183Q5T699 404 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 HENMT1Q5T8I9 393 aaKnown RBP0.04□□□□□ -2.4
PDGFC-208ENST00000512711 LAMTOR1Q6IAA8 161 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 DRAM2Q6UX65 266 aa0.04□□□□□ -2.4
PDGFC-208ENST00000512711 FAM43BQ6ZT52 329 aaPredicted RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms