RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TRAV14DV4A0A0A6YYC5 116 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 A0A0A6YYH2 397 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 TRAV40A0A0B4J280 105 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 IGHV1-18A0A0C4DH31 117 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 A0A0J9YW62 118 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 A6NJ64 397 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 TNFSF11O14788 317 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 NUPL2O15504 423 aaKnown RBP4.24□□□□□ -1.73
GYPB-212ENST00000511198 FGF16O43320 207 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ERAL1O75616 437 aaKnown RBP4.24□□□□□ -1.73
GYPB-212ENST00000511198 NKX2-2O95096 273 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 NDUFB2O95178 105 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 SIX6O95475 246 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 FCER2P06734 321 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 GKN3PP0CG01 181 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 HLA-GP17693 338 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 CDK2P24941 298 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 RPL35P42766 123 aaKnown RBP4.24□□□□□ -1.73
GYPB-212ENST00000511198 AKR1D1P51857 326 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 TAS2R19P59542 299 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 STXBP1P61764 594 aaKnown RBP4.24□□□□□ -1.73
GYPB-212ENST00000511198 GNB1P62873 340 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ERVK-25P63136 954 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 NAAAQ02083 359 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR1Q1Q15612 314 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 GUCA2BQ16661 112 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 PNLIPRP3Q17RR3 467 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 PCGF3Q3KNV8 242 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 Q499Y3 187 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 PAN3Q58A45 887 aaKnown RBP4.24□□□□□ -1.73
GYPB-212ENST00000511198 HES5Q5TA89 166 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 C1orf122Q6ZSJ8 110 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 Q75L30 129 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 SSX6Q7RTT6 188 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OLIG3Q7RTU3 272 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR2W3Q7Z3T1 314 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ZNF546Q86UE3 836 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 NDUFA11Q86Y39 141 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR2L13Q8N349 312 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 C12orf45Q8N5I9 185 aaPredicted RBP4.24□□□□□ -1.73
GYPB-212ENST00000511198 STPG4Q8N801 248 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ZNF615Q8N8J6 731 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ACOT4Q8N9L9 421 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 TMEM229BQ8NBD8 167 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR4C16Q8NGL9 310 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR9A2Q8NGT5 310 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR6S1Q8NH40 331 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR2V1Q8NHB1 315 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 PFN4Q8NHR9 129 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 GPR148Q8TDV2 347 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 MS4A6EQ96DS6 147 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 C16orf58Q96GQ5 468 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ARL5BQ96KC2 179 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ZNF681Q96N22 645 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 STACQ99469 402 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 GFI1Q99684 422 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 CITED2Q99967 270 aaPredicted RBP4.24□□□□□ -1.73
GYPB-212ENST00000511198 ZNF251Q9BRH9 671 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 ZNF426Q9BUY5 554 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 SEC11CQ9BY50 192 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 TMEM27Q9HBJ8 222 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 KLK11Q9UBX7 282 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 OR14J1Q9UGF5 321 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 CHRNA9Q9UGM1 479 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 GNG8Q9UK08 70 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 KCNE3Q9Y6H6 103 aa4.24□□□□□ -1.73
GYPB-212ENST00000511198 A0A0B4J2E0 115 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 A0A1B0GX12 115 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 URADA6NGE7 173 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 GGT3PA6NGU5 568 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 F8VVB4 439 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 F8VWA3 439 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 PHYHO14832 338 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 ARPC3O15145 178 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 MAGEB4O15481 346 aaPredicted RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 ERI3O43414 337 aaKnown RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 GATCO43716 136 aaKnown RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 PAGE4O60829 102 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 FOXH1O75593 365 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 GLCEO94923 617 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 DUS4LO95620 317 aaKnown RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 IGF2P01344 180 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 IGHV3-9P01782 118 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 RLN1P04808 185 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 S100A9P06702 114 aaKnown RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 S100A6P06703 90 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 TPT1P13693 172 aaKnown RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 GTF2F2P13984 249 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 SPI1P17947 270 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 MPZP25189 248 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 MAP3K8P41279 467 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 IER3P46695 156 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 LUMP51884 338 aaPredicted RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 CAPZA1P52907 286 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 SLC25A1P53007 311 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 HCCSP53701 268 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 RAB5BP61020 215 aa4.23□□□□□ -1.73
GYPB-212ENST00000511198 EIF5AP63241 154 aaKnown RBP4.23□□□□□ -1.73
GYPB-212ENST00000511198 MRPS11P82912 194 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms