RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 ZNF254O75437 659 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 APOL3O95236 402 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 SOX14O95416 240 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 GZMHP20718 246 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 RIDAP52758 137 aaKnown RBP6.92□□□□□ -1.3
PTPN20-223ENST00000509900 RPS16P62249 146 aaKnown RBP6.92□□□□□ -1.3
PTPN20-223ENST00000509900 PLGLAQ15195 96 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 ZNF562Q6V9R5 426 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 PLEKHG7Q6ZR37 379 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 ZNF367Q7RTV3 350 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 OR9Q2Q8NGE9 314 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 FRZBQ92765 325 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 CLCC1Q96S66 551 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 SCRT1Q9BWW7 348 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 MOB1AQ9H8S9 216 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 MDFICQ9P1T7 246 aa6.92□□□□□ -1.3
PTPN20-223ENST00000509900 GSTA4O15217 222 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 MAGEB4O15481 346 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-223ENST00000509900 CA2P00918 260 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 NCK1P16333 377 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 XGP55808 180 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 LIPEQ05469 1076 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 ODF4Q2M2E3 257 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 COQ5Q5HYK3 327 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 ODF3L1Q8IXM7 274 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 OR10V1Q8NGI7 309 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 OR5D18Q8NGL1 313 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 GRPEL2Q8TAA5 225 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 KCNG3Q8TAE7 436 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 CNIH3Q8TBE1 160 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 FAM162AQ96A26 154 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 USMG5Q96IX5 58 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 YIPF3Q9GZM5 350 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 R4GMQ9 66 aa6.91□□□□□ -1.3
PTPN20-223ENST00000509900 TMEM213A2RRL7 107 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 GASTP01350 101 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 RRM2P31350 389 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 OR3A3P47888 321 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 SSBP2P81877 361 aaPredicted RBP6.9□□□□□ -1.3
PTPN20-223ENST00000509900 ODF3L2Q3SX64 289 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 UBE2DNLQ8IWF7 75 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 OR2C3Q8N628 320 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 IQCF1Q8N6M8 205 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 Q8NAQ8 132 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 OR4A5Q8NH83 315 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 GALNT14Q96FL9 552 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 APOL4Q9BPW4 351 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 NDUFAF3Q9BU61 184 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 RHOFQ9HBH0 211 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 ZNF581Q9P0T4 197 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 IKZF2Q9UKS7 526 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 DMRT1Q9Y5R6 373 aa6.9□□□□□ -1.3
PTPN20-223ENST00000509900 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
PTPN20-223ENST00000509900 PRODHO43272 600 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 SYT7O43581 403 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 ORC5O43913 435 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 SERPINA3P01011 423 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 HLA-AP01891 365 aaKnown RBP6.89□□□□□ -1.31
PTPN20-223ENST00000509900 SEMG1P04279 462 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 SCTP09683 121 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 SLC2A5P22732 501 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 KCNJ3P48549 501 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 FXYD3Q14802 87 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 STEAP3Q658P3 488 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 FAM131AQ6UXB0 335 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 UXS1Q8NBZ7 420 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 BBS1Q8NFJ9 593 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 CCDC107Q8WV48 283 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 ADAT3Q96EY9 351 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-223ENST00000509900 NR1H4Q96RI1 486 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-223ENST00000509900 CHRDL1Q9BU40 450 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 GNG12Q9UBI6 72 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 ZNF230Q9UIE0 474 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-223ENST00000509900 SNX5Q9Y5X3 404 aa6.89□□□□□ -1.31
PTPN20-223ENST00000509900 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.88□□□□□ -1.31
PTPN20-223ENST00000509900 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 MPTX1A8MV57 137 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 PPP5D1E7EU14 171 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 NME4O00746 187 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 IFNA21P01568 189 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 IFNA17P01571 189 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 MRPL3P09001 348 aaKnown RBP6.88□□□□□ -1.31
PTPN20-223ENST00000509900 ATF1P18846 271 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 PRKACBP22694 351 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 MAGEA2P43356 314 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 EXOSC2Q13868 293 aaKnown RBP6.88□□□□□ -1.31
PTPN20-223ENST00000509900 ZNF833PQ6ZTB9 187 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 SAXO1Q8IYX7 474 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 OR5B3Q8NH48 314 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 ASB17Q8WXJ9 295 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 PP6455Q8WZ26 134 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 THRSPQ92748 146 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 OPALINQ96PE5 141 aa6.88□□□□□ -1.31
PTPN20-223ENST00000509900 IL1RAPQ9NPH3 570 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms