RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 PARP12Q9H0J9 701 aaKnown RBP6.55□□□□□ -1.36
SSBP2-213ENST00000509743 SAP30LQ9HAJ7 183 aa6.55□□□□□ -1.36
SSBP2-213ENST00000509743 DYNLRB1Q9NP97 96 aa6.55□□□□□ -1.36
SSBP2-213ENST00000509743 CALYQ9NYX4 217 aa6.55□□□□□ -1.36
SSBP2-213ENST00000509743 GNG12Q9UBI6 72 aa6.55□□□□□ -1.36
SSBP2-213ENST00000509743 LAMP3Q9UQV4 416 aa6.55□□□□□ -1.36
SSBP2-213ENST00000509743 RCL1Q9Y2P8 373 aaKnown RBP6.55□□□□□ -1.36
SSBP2-213ENST00000509743 RNF115Q9Y4L5 304 aa6.55□□□□□ -1.36
SSBP2-213ENST00000509743 RIF1Q5UIP0 2472 aaKnown RBP6.55□□□□□ -1.36
SSBP2-213ENST00000509743 MFSD2BA6NFX1 497 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 NUDT19A8MXV4 375 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 FAM90A26D6RGX4 464 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 E7EQL1 145 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 KCNAB3O43448 404 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 YPEL1O60688 119 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 CYB5R3P00387 301 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 ZNF16P17020 682 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 RAB7AP51149 207 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 EDDM3BP56851 147 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 TMEM33P57088 247 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 CCL8P80075 99 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 HOXA4Q00056 320 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 ID3Q02535 119 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 BAXQ07812 192 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 EIF4EBP1Q13541 118 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 HSD17B13Q7Z5P4 300 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 DMRTC2Q8IXT2 367 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 OR2C3Q8N628 320 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 TPRX1Q8N7U7 411 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 UBAC2Q8NBM4 344 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 GALNT11Q8NCW6 608 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 ZNRF1Q8ND25 227 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 DMBX1Q8NFW5 382 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 RNF141Q8WVD5 230 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 CORO2AQ92828 525 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 GPR146Q96CH1 333 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 YPEL2Q96QA6 119 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 C11orf1Q9H5F2 150 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 LINC00574Q9H8X3 128 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 KCNJ16Q9NPI9 418 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 LYRM2Q9NU23 88 aaPredicted RBP6.54□□□□□ -1.36
SSBP2-213ENST00000509743 COA4Q9NYJ1 87 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 LPAR3Q9UBY5 353 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 FBXL17Q9UF56 701 aa6.54□□□□□ -1.36
SSBP2-213ENST00000509743 PPIAL4EA0A075B759 164 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 KBTBD11-OT1A0A1B0GTJ5 212 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 hADV38S2A0JD32 116 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 ZNF729A6NN14 1252 aaPredicted RBP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 PPIAL4DF5H284 164 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 TMEM178BH3BS89 294 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 FGF16O43320 207 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 SSSCA1O60232 199 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 PITX3O75364 302 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CLDN1O95832 211 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 IGKV1-39P01597 117 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 IGKV1D-39P04432 117 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 PPIAL4FP0DN26 164 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CGB3P0DN86 165 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CGB7P0DN87 165 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 EPHA1P21709 976 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 KIR2DS2P43631 304 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 LPAR6P43657 344 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 ADORA2A-AS1P86434 159 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 EWSR1Q01844 656 aaKnown RBP eCLIP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 MEF2CQ06413 473 aaPredicted RBP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 AANATQ16613 207 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 ZNF585BQ52M93 769 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 FAM74A1Q5RGS3 127 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 RPL7L1Q6DKI1 246 aaKnown RBP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 EIF4E3Q8N5X7 224 aaKnown RBP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 OR10A7Q8NGE5 316 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CA5BP1Q8WTZ4 195 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 PCNPQ8WW12 178 aaKnown RBP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 TCTEX1D2Q8WW35 142 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 RAB40CQ96S21 281 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 GPHA2Q96T91 129 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CCL13Q99616 98 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 TMEM106BQ9NUM4 274 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 SDHAF2Q9NX18 166 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 TAS2R3Q9NYW6 316 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CLN8Q9UBY8 286 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 PSG11Q9UQ72 335 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 GAB2Q9UQC2 676 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 PPIAL4AQ9Y536 164 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 MMP24Q9Y5R2 645 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CNOT1A5YKK6 2376 aaKnown RBP6.53□□□□□ -1.36
SSBP2-213ENST00000509743 FAM186AA6NE01 2351 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CEP295Q9C0D2 2601 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 CNTRLQ7Z7A1 2325 aa6.53□□□□□ -1.36
SSBP2-213ENST00000509743 FRYQ5TBA9 3013 aa6.52□□□□□ -1.37
SSBP2-213ENST00000509743 ANKRD11Q6UB99 2663 aaPredicted RBP6.52□□□□□ -1.37
SSBP2-213ENST00000509743 IGHV3-43A0A0B4J1X8 118 aa6.52□□□□□ -1.37
SSBP2-213ENST00000509743 A0A0G2JRQ6 117 aa6.52□□□□□ -1.37
SSBP2-213ENST00000509743 I3L521 148 aa6.52□□□□□ -1.37
SSBP2-213ENST00000509743 RBFOX2O43251 390 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSBP2-213ENST00000509743 NDUFA2O43678 99 aa6.52□□□□□ -1.37
SSBP2-213ENST00000509743 CLDN14O95500 239 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms