RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 BAIAP2L2Q6UXY1 529 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 C16orf82Q7Z2V1 217 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 OR10V1Q8NGI7 309 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 OR10J5Q8NHC4 309 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
NUP54-207ENST00000508583 DUX5Q96PT3 197 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 GINS4Q9BRT9 223 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 HDHD3Q9BSH5 251 aaPredicted RBP7.39□□□□□ -1.23
NUP54-207ENST00000508583 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 CHIAQ9BZP6 476 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 NDUFA13Q9P0J0 144 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 PIPOXQ9P0Z9 390 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 RABL2AQ9UBK7 228 aaPredicted RBP7.39□□□□□ -1.23
NUP54-207ENST00000508583 SLC23A1Q9UHI7 598 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 RABL2BQ9UNT1 228 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 IGHV3-43A0A0B4J1X8 118 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 FAM181BA6NEQ2 426 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 FAM25AB3EWG3 89 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 FAM25CB3EWG5 89 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 FAM25GB3EWG6 89 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 H3BMQ9 156 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 LY6LH3BQJ8 138 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 M0QZK8 103 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 HSD17B6O14756 317 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 RAB29O14966 203 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 RGS5O15539 181 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 GPR137BO60478 399 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 IGHV3-7P01780 117 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 IGHV3-43DP0DP04 118 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 HKR1P10072 659 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 PPP1CCP36873 323 aaKnown RBP7.38□□□□□ -1.23
NUP54-207ENST00000508583 CEACAM6P40199 344 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 KRTAP24-1Q3LI83 254 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 OLFML2AQ68BL7 652 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 THNSL2Q86YJ6 484 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 TGIF2LXQ8IUE1 241 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 LYG1Q8N1E2 194 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 OR4F5Q8NH21 305 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 UBALD1Q8TB05 177 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 C17orf50Q8WW18 174 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 LEAP2Q969E1 77 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 AJUBAQ96IF1 538 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 S1PR3Q99500 378 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 CABLES2Q9BTV7 478 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 ST6GALNAC5Q9BVH7 336 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 RANBP3Q9H6Z4 567 aaPredicted RBP7.38□□□□□ -1.23
NUP54-207ENST00000508583 AUNIPQ9H7T9 357 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 IFT46Q9NQC8 304 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 TNFRSF19Q9NS68 423 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 RSL24D1Q9UHA3 163 aaKnown RBP7.38□□□□□ -1.23
NUP54-207ENST00000508583 TCF19Q9Y242 345 aa7.38□□□□□ -1.23
NUP54-207ENST00000508583 BET1O15155 118 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 LANCL1O43813 399 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 NDUFA7O95182 113 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 SCTP09683 121 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 PRSS3P35030 304 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 TAS2R20P59543 309 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 ARPC4P59998 168 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 PLA1AQ53H76 456 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 CT45A1Q5HYN5 189 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 CNIH2Q6PI25 160 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 C11orf88Q6PI97 169 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.37□□□□□ -1.23
NUP54-207ENST00000508583 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.37□□□□□ -1.23
NUP54-207ENST00000508583 ZNF439Q8NDP4 499 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 OR52L2PQ8NGH6 319 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 OR4C13Q8NGP0 309 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 CT45A3Q8NHU0 189 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 NUDCD2Q8WVJ2 157 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 RTN4IP1Q8WWV3 396 aaPredicted RBP7.37□□□□□ -1.23
NUP54-207ENST00000508583 SCPEP1Q9HB40 452 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 BEX1Q9HBH7 125 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 ANXA10Q9UJ72 324 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 ZNF221Q9UK13 617 aa7.37□□□□□ -1.23
NUP54-207ENST00000508583 RBM7Q9Y580 266 aaKnown RBP7.37□□□□□ -1.23
NUP54-207ENST00000508583 TRBV6-7A0A0A0MS04 114 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 IGHV1-3A0A0C4DH29 117 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 A0A1W2PPE3 182 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 TMEM89A2RUT3 159 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 SULT1C2O00338 296 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 TIMM23O14925 209 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 HPGDSO60760 199 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 SLC22A5O76082 557 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 GSTT2P0CG29 244 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 GSTT2BP0CG30 244 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 CD1BP29016 333 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 COMPP49747 757 aaPredicted RBP7.36□□□□□ -1.23
NUP54-207ENST00000508583 RAG2P55895 527 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 TAS2R46P59540 309 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 HES1Q14469 280 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 GNMTQ14749 295 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 SPCS2Q15005 226 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 LY6EQ16553 131 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 MOB3BQ86TA1 216 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 IZUMO1Q8IYV9 350 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 DYNAPQ8N1N2 210 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 BEST4Q8NFU0 473 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 OR56B4Q8NH76 319 aa7.36□□□□□ -1.23
NUP54-207ENST00000508583 SPATA3Q8NHX4 192 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms