RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ACOT13Q9NPJ3 140 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 PARP11Q9NR21 331 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 PKHD1P08F94 4074 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 IGHV3-43A0A0B4J1X8 118 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 A0A1W2PN81 502 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 OR4C45A6NMZ5 311 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 SLC31A2O15432 143 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 SULT1B1O43704 296 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 LANCL1O43813 399 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 NOL3O60936 208 aaKnown RBP7.19□□□□□ -1.26
NEDD9-211ENST00000508546 IGHV3-43DP0DP04 118 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 PSMB9P28065 219 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 BLVRBP30043 206 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-211ENST00000508546 ATP6V1E1P36543 226 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 CHRNA7P36544 502 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 ACTBP60709 375 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 RAB40BQ12829 278 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 IRF3Q14653 427 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 C5orf64Q2M2E5 130 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 TMEM30BQ3MIR4 351 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 CT45A1Q5HYN5 189 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 NHLRC3Q5JS37 347 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 UBE2UQ5VVX9 321 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 STEAP3Q658P3 488 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 ASCL4Q6XD76 172 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 ANKRD13BQ86YJ7 626 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 SERPINA12Q8IW75 414 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 PARP16Q8N5Y8 322 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 TCTEX1D1Q8N7M0 179 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 OR5D14Q8NGL3 314 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 CT45A3Q8NHU0 189 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 LGALS12Q96DT0 336 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 CPNE2Q96FN4 548 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-211ENST00000508546 TMEM80Q96HE8 168 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 CST11Q9H112 138 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 DIMT1Q9UNQ2 313 aaKnown RBP7.19□□□□□ -1.26
NEDD9-211ENST00000508546 FOXA2Q9Y261 457 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-211ENST00000508546 ERGIC3Q9Y282 383 aa7.19□□□□□ -1.26
NEDD9-211ENST00000508546 C12orf77C9JDV5 145 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 MYL12BO14950 172 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 NBR2O15453 112 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 NDUFA3O95167 84 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 MYL12AP19105 171 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 CNTFRP26992 372 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 DCKP27707 260 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF134P52741 427 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 ALKBH1Q13686 389 aaKnown RBP7.18□□□□□ -1.26
NEDD9-211ENST00000508546 RSU1Q15404 277 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 PYHIN1Q6K0P9 492 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 LIN54Q6MZP7 749 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF367Q7RTV3 350 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 LINC00596Q86U02 117 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 HAPLN4Q86UW8 402 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 CLVS1Q8IUQ0 354 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-211ENST00000508546 NPBQ8NG41 125 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 OR52I1Q8NGK6 324 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 UBALD1Q8TB05 177 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF251Q9BRH9 671 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 THAP7Q9BT49 309 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-211ENST00000508546 MND1Q9BWT6 205 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 KRTAP4-5Q9BYR2 181 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 HIPK2Q9H2X6 1198 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 TUBA4BQ9H853 241 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 RAB9BQ9NP90 201 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 MRPS18AQ9NVS2 196 aaKnown RBP7.18□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF581Q9P0T4 197 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 RSL24D1Q9UHA3 163 aaKnown RBP7.18□□□□□ -1.26
NEDD9-211ENST00000508546 ST3GAL6Q9Y274 331 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 CEPT1Q9Y6K0 416 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 HERC1Q15751 4861 aa7.18□□□□□ -1.26
NEDD9-211ENST00000508546 H0Y980 276 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF701M0R085 212 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 GABRPO00591 440 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 OR7C1O76099 320 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 HTR3BO95264 441 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 MT-ND4P03905 459 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 CSTBP04080 98 aaKnown RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 RBM11P57052 281 aaKnown RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 NDPQ00604 133 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 ECSCRQ19T08 205 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 MPV17LQ2QL34 196 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 SYT6Q5T7P8 510 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 GPR107Q5VW38 600 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 RNLSQ5VYX0 342 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF660Q6AZW8 331 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF529Q6P280 563 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 CD200R1LQ6Q8B3 271 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 LINC00322Q6ZN03 302 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF497Q6ZNH5 498 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 OR10K1Q8NGX5 313 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 CCDC107Q8WV48 283 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 TNFAIP8L1Q8WVP5 186 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 DGCR14Q96DF8 476 aaKnown RBP7.17□□□□□ -1.26
NEDD9-211ENST00000508546 PELI1Q96FA3 418 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 RITA1Q96K30 269 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 RHOVQ96L33 236 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 RSRP1Q9BUV0 290 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
NEDD9-211ENST00000508546 FGF20Q9NP95 211 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms