RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 HDHD3Q9BSH5 251 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 PRDM13Q9H4Q3 707 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 KLF13Q9Y2Y9 288 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 TRBV24-1A0A075B6N3 115 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 METTL12A8MUP2 240 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 SLC17A3O00476 420 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 TNFSF14O43557 240 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 COX6CP09669 75 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 MPZP25189 248 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 FUT5Q11128 374 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 PIGYQ3MUY2 71 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 OR5A1Q8NGJ0 315 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 OR1K1Q8NGR3 316 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 OR10D3Q8NH80 312 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 ELSPBP1Q96BH3 223 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 MISP3Q96FF7 219 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 JKAMPQ9P055 326 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 ITGB4P16144 1822 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 NUP214P35658 2090 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 A0A1W2PPV9 198 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 CYR61O00622 381 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 KLF4O43474 513 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 SRSF3P84103 164 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 RELQ04864 619 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 SLC23A3Q6PIS1 610 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 LYG1Q8N1E2 194 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 DERL1Q9BUN8 251 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 C19orf24Q9BVV8 132 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 IL36GQ9NZH8 169 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 RAMP1O60894 148 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 NUDT3O95989 172 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 ORM2P19652 201 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 GZMHP20718 246 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 ACP1P24666 158 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 LY6G6FQ5SQ64 297 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 OR1B1Q8NGR6 318 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 RLN3Q8WXF3 142 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 PAXXQ9BUH6 204 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 RNF122Q9H9V4 155 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 CLN8Q9UBY8 286 aa6.36□□□□□ -1.39
UBE2D3-224ENST00000508474 J3QT63 122 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 ZNF137PP52743 207 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 ARF6P62330 175 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 SRSF5Q13243 272 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 RNPS1Q15287 305 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 PRSS41Q7RTY9 318 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 ZAR1Q86SH2 424 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 GPR146Q96CH1 333 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 SPSB2Q99619 263 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 SIGMAR1Q99720 223 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 SFXN3Q9BWM7 321 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 CHODLQ9H9P2 273 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 GLI3P10071 1580 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 DEFB108AA8MXU0 73 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 SNRPCP09234 159 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 RPL11P62913 178 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 PNKDQ8N490 385 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 MRGPRDQ8TDS7 321 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 ZPBPQ9BS86 351 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 SPCS1Q9Y6A9 102 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 IGLV1-36A0A0B4J1U3 117 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 LOC107984156A0A0G2JMH3 177 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 PGLYRP1O75594 196 aaPredicted RBP6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 NGFRP08138 427 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 ARL17AQ8IVW1 177 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 C5orf30Q96GV9 206 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 RCC1LQ96I51 464 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 HIST1H4GQ99525 98 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 RNF126Q9BV68 326 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 WNK3Q9BYP7 1800 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 CACNA1CQ13936 2221 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 LAMB2P55268 1798 aa6.35□□□□□ -1.39
UBE2D3-224ENST00000508474 A0A1W2PR80 420 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 SHISA8B8ZZ34 492 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 CBLN1P23435 193 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 GPR3P46089 330 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 RPL30P62888 115 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 DUSP2Q05923 314 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 SNAI3Q3KNW1 292 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 LINC01590Q5TEZ4 76 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 IMMP2LQ96T52 175 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 CXXC4Q9H2H0 198 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 RPRMQ9NS64 109 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 TRAV39A0A0B4J263 110 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 ZNF205O95201 554 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 SELENOTP62341 195 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 SLC35B1P78383 322 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 MRPS11P82912 194 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 PYY3Q5JQD4 70 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 Q5PR19 223 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 RFESDQ8TAC1 157 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 SNRNP40Q96DI7 357 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 OR8B2Q96RD0 313 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 WFDC6Q9BQY6 131 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 SMOC1Q9H4F8 434 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 MMP17Q9ULZ9 603 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 ATP23Q9Y6H3 246 aa6.34□□□□□ -1.39
UBE2D3-224ENST00000508474 TAF1P21675 1872 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms