RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
RAB28-205ENST00000508274 ANKRD60Q9BZ19 345 aa11.23□□□□□ -0.61
RAB28-205ENST00000508274 RGS10O43665 173 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 CRHBPP24387 322 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 BLVRBP30043 206 aaPredicted RBP11.22□□□□□ -0.61
RAB28-205ENST00000508274 MAP2K4P45985 399 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 OR3A3P47888 321 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 HTD2P86397 168 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 TPBGQ13641 420 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 STEAP3Q658P3 488 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 ZNF554Q86TJ5 538 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 SVOPQ8N4V2 548 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 OR6M1Q8NGM8 313 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 KCNG3Q8TAE7 436 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 IL1F10Q8WWZ1 152 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 GALMQ96C23 342 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 RASL11BQ9BPW5 248 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 HDHD3Q9BSH5 251 aaPredicted RBP11.22□□□□□ -0.61
RAB28-205ENST00000508274 CCDC90BQ9GZT6 254 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 LPAR5Q9H1C0 372 aa11.22□□□□□ -0.61
RAB28-205ENST00000508274 AK6Q9Y3D8 172 aaKnown RBP11.22□□□□□ -0.61
RAB28-205ENST00000508274 SAA2-SAA4A0A096LPE2 208 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 SOCS1O15524 211 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 YPEL1O60688 119 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 BPNT1O95861 308 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.61
RAB28-205ENST00000508274 SAA2P0DJI9 122 aaPredicted RBP11.21□□□□□ -0.61
RAB28-205ENST00000508274 CNTFRP26992 372 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 HOXD3P31249 432 aaPredicted RBP11.21□□□□□ -0.61
RAB28-205ENST00000508274 KRTAP10-11P60412 298 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 OR51D1Q8NGF3 324 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 SETD6Q8TBK2 473 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 RITA1Q96K30 269 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 YPEL2Q96QA6 119 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 NABP2Q9BQ15 211 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 PLGRKTQ9HBL7 147 aa11.21□□□□□ -0.61
RAB28-205ENST00000508274 CHMP1AQ9HD42 196 aaPredicted RBP11.21□□□□□ -0.61
RAB28-205ENST00000508274 ST8SIA5O15466 376 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 NAPSAO96009 420 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 CPEP16870 476 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 CLDN12P56749 244 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 FABP5Q01469 135 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 MLLT11Q13015 90 aaPredicted RBP11.2□□□□□ -0.62
RAB28-205ENST00000508274 MMDQ15546 238 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 PNLIPRP3Q17RR3 467 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 ZNF880Q6PDB4 577 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 IZUMO2Q6UXV1 221 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 COMMD1Q8N668 190 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 OR8H1Q8NGG4 311 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 PARP12Q9H0J9 701 aaKnown RBP11.2□□□□□ -0.62
RAB28-205ENST00000508274 IFI27L2Q9H2X8 130 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 PLEKHJ1Q9NW61 149 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 K7EIL1 84 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 SLC17A2O00624 439 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 ARSBP15848 533 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 SOX6P35712 828 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 CFHR3Q02985 330 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 ZNF833PQ6ZTB9 187 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 PRSS48Q7RTY5 328 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 ZNF695Q8IW36 515 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 OR2AK2Q8NG84 335 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 CNBD2Q96M20 576 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 P2RX4Q99571 388 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 MGLLQ99685 303 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 ISYNA1Q9NPH2 558 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 AK3Q9UIJ7 227 aa11.2□□□□□ -0.62
RAB28-205ENST00000508274 COL7A1Q02388 2944 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 WI2-2373I1.2A0A1W2PRP0 233 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 RGS11O94810 467 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
RAB28-205ENST00000508274 CALRP27797 417 aaKnown RBP11.19□□□□□ -0.62
RAB28-205ENST00000508274 ACTBP60709 375 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 PLA2G7Q13093 441 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 LY6G6FQ5SQ64 297 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 ABRACLQ9P1F3 81 aa11.19□□□□□ -0.62
RAB28-205ENST00000508274 ZNF107Q9UII5 783 aaPredicted RBP11.19□□□□□ -0.62
RAB28-205ENST00000508274 FOXI3A8MTJ6 420 aaPredicted RBP11.18□□□□□ -0.62
RAB28-205ENST00000508274 ARL6IP5O75915 188 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 MYCNOSP40205 109 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 TMEM50BP56557 158 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 TRAM1Q15629 374 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 RAB11BQ15907 218 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 RPL39P5Q59GN2 51 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 CXorf66Q5JRM2 361 aaPredicted RBP11.18□□□□□ -0.62
RAB28-205ENST00000508274 FAM131AQ6UXB0 335 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 ZNF251Q9BRH9 671 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 URM1Q9BTM9 101 aaKnown RBP11.18□□□□□ -0.62
RAB28-205ENST00000508274 OR1A1Q9P1Q5 309 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 STEAP1Q9UHE8 339 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 LRRC42Q9Y546 428 aa11.18□□□□□ -0.62
RAB28-205ENST00000508274 TRBV6-6A0A0A6YYG2 114 aa11.17□□□□□ -0.62
RAB28-205ENST00000508274 IGHG4P01861 327 aa11.17□□□□□ -0.62
RAB28-205ENST00000508274 IGF1P05019 195 aa11.17□□□□□ -0.62
RAB28-205ENST00000508274 VDAC1P21796 283 aa11.17□□□□□ -0.62
RAB28-205ENST00000508274 PSMA1P25786 263 aaKnown RBP11.17□□□□□ -0.62
RAB28-205ENST00000508274 SLC6A1P30531 599 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms