RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 ERGIC3Q9Y282 383 aa12.38□□□□□ -0.43
SSBP2-207ENST00000507472 WSB1Q9Y6I7 421 aa12.38□□□□□ -0.43
SSBP2-207ENST00000507472 G3V318 75 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 YPEL1O60688 119 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 OR5H8P0DN80 308 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 CNTFRP26992 372 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 CHATP28329 748 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 OR3A3P47888 321 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 ACTBP60709 375 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 DCTN2Q13561 401 aaKnown RBP12.37□□□□□ -0.43
SSBP2-207ENST00000507472 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
SSBP2-207ENST00000507472 C6orf141Q5SZD1 244 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 C9orf66Q5T8R8 295 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 YPEL2Q96QA6 119 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 NABP2Q9BQ15 211 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■■■□ 23.6
SSBP2-207ENST00000507472 FKBP14Q9NWM8 211 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 SCOCQ9UIL1 159 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 LRRC42Q9Y546 428 aa12.37□□□□□ -0.43
SSBP2-207ENST00000507472 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 SEC14L6B5MCN3 397 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 UBBP0CG47 229 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 VSIG8P0DPA2 414 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 HTR2CP28335 458 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 PPIFP30405 207 aaKnown RBP12.36□□□□□ -0.43
SSBP2-207ENST00000507472 TMEM65Q6PI78 240 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 C6orf201Q7Z4U5 140 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 LRRTM1Q86UE6 522 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 ANKRD60Q9BZ19 345 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 OR51J1Q9H342 316 aa12.36□□□□□ -0.43
SSBP2-207ENST00000507472 LSM4Q9Y4Z0 139 aaKnown RBP12.36□□□□□ -0.43
SSBP2-207ENST00000507472 IGHV7-81A0A0B4J1V7 117 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 ATP6V0E1O15342 81 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 RGS11O94810 467 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 HLA-DRB1P01911 266 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 ECI1P42126 302 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
SSBP2-207ENST00000507472 GABPB1Q06547 395 aaPredicted RBP12.35□□□□□ -0.43
SSBP2-207ENST00000507472 FHL3Q13643 280 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 LY6G6FQ5SQ64 297 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 OGFRL1Q5TC84 451 aaPredicted RBP12.35□□□□□ -0.43
SSBP2-207ENST00000507472 LIN54Q6MZP7 749 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 ZNF833PQ6ZTB9 187 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 MS4A15Q8N5U1 240 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 OR2AK2Q8NG84 335 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 MYOZ3Q8TDC0 251 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 IL1F10Q8WWZ1 152 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 UBE2E2Q96LR5 201 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 PRR25Q96S07 402 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 TMED9Q9BVK6 235 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 GNB4Q9HAV0 340 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 ABRACLQ9P1F3 81 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 SORL1Q92673 2214 aa12.35□□□□□ -0.43
SSBP2-207ENST00000507472 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 PTGES3LE9PB15 166 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 NBR2O15453 112 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 IGLV1-40P01703 118 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 CDK1P06493 297 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
SSBP2-207ENST00000507472 SRMP19623 302 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 HMGN3Q15651 99 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 C5orf64Q2M2E5 130 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 ZNF260Q3ZCT1 412 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 RNLSQ5VYX0 342 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 GLT8D1Q68CQ7 371 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 CEACAM19Q7Z692 300 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 ZNF491Q8N8L2 437 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 NPBQ8NG41 125 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 PHYHIPQ92561 330 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 WWC2-AS2Q96NR7 200 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 OR5B12Q96R08 314 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 NICN1Q9BSH3 213 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 KCNK15Q9H427 330 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 PARP11Q9NR21 331 aa12.34□□□□□ -0.43
SSBP2-207ENST00000507472 TRAV41A0A0B4J266 112 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 I3L521 148 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 CASQ2O14958 399 aaPredicted RBP12.33□□□□□ -0.44
SSBP2-207ENST00000507472 ST8SIA5O15466 376 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 BLVRBP30043 206 aaPredicted RBP12.33□□□□□ -0.44
SSBP2-207ENST00000507472 UNC119Q13432 240 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 SPHARQ15513 63 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
SSBP2-207ENST00000507472 OR1N2Q8NGR9 330 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 KCNG3Q8TAE7 436 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 MND1Q9BWT6 205 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 TM2D1Q9BX74 207 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 STEAP1Q9UHE8 339 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 VSIG4Q9Y279 399 aa12.33□□□□□ -0.44
SSBP2-207ENST00000507472 TMEM14DPA8MWL7 114 aa12.32□□□□□ -0.44
SSBP2-207ENST00000507472 RAB29O14966 203 aa12.32□□□□□ -0.44
SSBP2-207ENST00000507472 SLC22A1O15245 554 aa12.32□□□□□ -0.44
SSBP2-207ENST00000507472 NAPSAO96009 420 aa12.32□□□□□ -0.44
SSBP2-207ENST00000507472 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
SSBP2-207ENST00000507472 CD37P11049 281 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms